RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 WFDC8Q8IUA0 241 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 CYB561D1Q8N8Q1 229 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 C16orf52Q8NHV5 167 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 SH2D2AQ9NP31 389 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 UFC1Q9Y3C8 167 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 OR2W1Q9Y3N9 320 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 AUP1Q9Y679 476 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 COX11Q9Y6N1 276 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 PRR33A8MZF0 331 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 PAGE4O60829 102 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 EMDP50402 254 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 JMJD6Q6NYC1 403 aaPredicted RBP7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 C5orf30Q96GV9 206 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 C6orf106Q9H6K1 298 aaPredicted RBP7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 PAPPA2Q9BXP8 1791 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 DPRXA6NFQ7 191 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 H0Y8X5 98 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 MGAT2Q10469 447 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 IL11RAQ14626 422 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 TMEM95Q3KNT9 176 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 WBP2Q969T9 261 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 MYEOVQ96EZ4 313 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 HSPB7Q9UBY9 170 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 POLDIP2Q9Y2S7 368 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 WDR81Q562E7 1941 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 C7orf66A4D0T2 115 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 PRR35P0CG20 571 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 LHFPL2Q6ZUX7 228 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 CA13Q8N1Q1 262 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 C17orf47Q8NEP4 570 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 TXNIPQ9H3M7 391 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 PDFQ9HBH1 243 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 B9D1Q9UPM9 204 aa7.72□□□□□ -1.17
LIMCH1-218ENST00000513024 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 PLA2G10O15496 165 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 PRSS2P07478 247 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 RPL34P49207 117 aaKnown RBP7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 DYNLT3P51808 116 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 UBE2L3P68036 154 aaKnown RBP7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 YRDCQ86U90 279 aaKnown RBP7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 VASH2Q86V25 355 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 LINC01465Q8N7H1 131 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 OR5A1Q8NGJ0 315 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 TMEM171Q8WVE6 324 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 MRPS24Q96EL2 167 aaKnown RBP7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 MVB12AQ96EY5 273 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 WDR13Q9H1Z4 485 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 FLRT3Q9NZU0 649 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 F11RQ9Y624 299 aaKnown RBP7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 SPRY1O43609 319 aaPredicted RBP7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 ICOSLGO75144 302 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 ZNF324O75467 553 aaPredicted RBP7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 PDCD1Q15116 288 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 TBC1D28Q2M2D7 210 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 TMEM249Q2WGJ8 235 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 TUSC5Q8IXB3 177 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 DEFB108BQ8NET1 73 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 SLC25A43Q8WUT9 341 aaPredicted RBP7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 NEUROG1Q92886 237 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 GNRHR2Q96P88 292 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 TNFSF18Q9UNG2 199 aa7.71□□□□□ -1.17
LIMCH1-218ENST00000513024 A0A1B0GTH9 108 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 SH2D1BO14796 132 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 DNAL4O96015 105 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 TYMSP04818 313 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 FAM157CP0CG43 387 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 BCL2P10415 239 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 OTX1P32242 354 aaPredicted RBP7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 ZNF121P58317 390 aaPredicted RBP7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 HDHD3Q9BSH5 251 aaPredicted RBP7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 CHODLQ9H9P2 273 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 MRPL16Q9NX20 251 aaKnown RBP7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 ELOVL5Q9NYP7 299 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 TRAV8-7A0A075B6U6 113 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 A0A096LPE4 126 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 A0A1W2PPZ6 126 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 LDLRAD4O15165 306 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 CTDSPLO15194 276 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 HMGA1P17096 107 aaKnown RBP7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 P2RY4P51582 365 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 ZNF841Q6ZN19 808 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 H1FOOQ8IZA3 346 aaPredicted RBP7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 ATOH7Q8N100 152 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 TTC9CQ8N5M4 171 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 KTI12Q96EK9 354 aaPredicted RBP7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 S1PR5Q9H228 398 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 ICAM5Q9UMF0 924 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 V9GYH0 126 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 ARID2Q68CP9 1835 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 COL4A5P29400 1685 aa7.71□□□□□ -1.18
LIMCH1-218ENST00000513024 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.7□□□□□ -1.18
LIMCH1-218ENST00000513024 ZNF785A8K8V0 405 aa7.7□□□□□ -1.18
LIMCH1-218ENST00000513024 LINC01565O15544 149 aa7.7□□□□□ -1.18
LIMCH1-218ENST00000513024 PLPP2O43688 288 aa7.7□□□□□ -1.18
LIMCH1-218ENST00000513024 GSTZ1O43708 216 aaPredicted RBP7.7□□□□□ -1.18
LIMCH1-218ENST00000513024 DHRS3O75911 302 aa7.7□□□□□ -1.18
LIMCH1-218ENST00000513024 HSPB1P04792 205 aaKnown RBP7.7□□□□□ -1.18
LIMCH1-218ENST00000513024 MNX1P50219 401 aaPredicted RBP7.7□□□□□ -1.18
LIMCH1-218ENST00000513024 ZNF816Q0VGE8 651 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms