RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 CDX1P47902 265 aaPredicted RBP11.05□□□□□ -0.64
HMGB2-205ENST00000511316 FUT6P51993 359 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 PCBD1P61457 104 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 VAMP2P63027 116 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 PNRC1Q12796 327 aaPredicted RBP11.05□□□□□ -0.64
HMGB2-205ENST00000511316 TMEM176BQ3YBM2 270 aaPredicted RBP11.05□□□□□ -0.64
HMGB2-205ENST00000511316 CRIP3Q6Q6R5 217 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 GFRALQ6UXV0 394 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 HEPN1Q6WQI6 88 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 C1QL2Q7Z5L3 287 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 OSR2Q8N2R0 312 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 GPR137CQ8N3F9 429 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 OR5D18Q8NGL1 313 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 RELTQ969Z4 430 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 DEFB127Q9H1M4 99 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 PLEK2Q9NYT0 353 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 AK3Q9UIJ7 227 aa11.05□□□□□ -0.64
HMGB2-205ENST00000511316 LRP5LA4QPB2 252 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 EWSR1Q01844 656 aaKnown RBP eCLIP11.04□□□□□ -0.641e-10■□□□□ 10.1
HMGB2-205ENST00000511316 ACSF3Q4G176 576 aaPredicted RBP11.04□□□□□ -0.64
HMGB2-205ENST00000511316 AKIRIN2Q53H80 203 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 TMEM42Q69YG0 159 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 FBXL14Q8N1E6 418 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 FAM213BQ8TBF2 198 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 TOMM40LQ969M1 308 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 NABP1Q96AH0 204 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 TMEM56Q96MV1 263 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 PSMG3-AS1Q96PY0 264 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 LYRM2Q9NU23 88 aaPredicted RBP11.04□□□□□ -0.64
HMGB2-205ENST00000511316 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 MIOXQ9UGB7 285 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 TMEM56-RWDD3S4R434 201 aa11.04□□□□□ -0.64
HMGB2-205ENST00000511316 ICE1Q9Y2F5 2266 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 TRAV1-1A0A0B4J248 108 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 ZNF729A6NN14 1252 aaPredicted RBP11.03□□□□□ -0.64
HMGB2-205ENST00000511316 SEC14L6B5MCN3 397 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 TRDCB7Z8K6 153 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 NDUFS6O75380 124 aaKnown RBP11.03□□□□□ -0.64
HMGB2-205ENST00000511316 IGHV2-70P01814 119 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 OR8U8P0C7N1 319 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 SLC25A6P12236 298 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 NKX2-1P43699 371 aaPredicted RBP11.03□□□□□ -0.64
HMGB2-205ENST00000511316 DSCR4P56555 118 aaPredicted RBP11.03□□□□□ -0.64
HMGB2-205ENST00000511316 C3AR1Q16581 482 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 KHDC3LQ587J8 217 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 ADAM5Q6NVV9 412 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 RTN4RL2Q86UN3 420 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 DOLPP1Q86YN1 238 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 TMEM123Q8N131 208 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 HPSE2Q8WWQ2 592 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 NIPSNAP3BQ9BS92 247 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 ULBP2Q9BZM5 246 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 TMEM222Q9H0R3 208 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 TREM2Q9NZC2 230 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 PLA2G2EQ9NZK7 142 aa11.03□□□□□ -0.64
HMGB2-205ENST00000511316 RCL1Q9Y2P8 373 aaKnown RBP11.03□□□□□ -0.64
HMGB2-205ENST00000511316 PHF3Q92576 2039 aaKnown RBP11.03□□□□□ -0.64
HMGB2-205ENST00000511316 SPTBN1Q01082 2364 aaKnown RBP11.03□□□□□ -0.64
HMGB2-205ENST00000511316 C3orf85A0A1B0GTC6 90 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 A0A1W2PNR3 127 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 LINC00587B1AMM8 73 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 FUT3P21217 361 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 CRYGSP22914 178 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 CA7P43166 264 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 CLDN15P56746 228 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 SLC10A1Q14973 349 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 C4orf17Q53FE4 359 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 ZNF506Q5JVG8 444 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 SLC16A13Q7RTY0 426 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 RNF144BQ7Z419 303 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 DPPA2Q7Z7J5 298 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 C20orf196Q8IYI0 205 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 SAXO1Q8IYX7 474 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 FAM24BQ8N5W8 94 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 OR2G3Q8NGZ4 309 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 PIGTQ969N2 578 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 TVP23CQ96ET8 276 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 YPEL4Q96NS1 127 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 SOX7Q9BT81 388 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 RIMS4Q9H426 269 aaPredicted RBP11.02□□□□□ -0.64
HMGB2-205ENST00000511316 PARPBPQ9NWS1 579 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 FOXD3Q9UJU5 478 aaPredicted RBP11.02□□□□□ -0.64
HMGB2-205ENST00000511316 TINAGQ9UJW2 476 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 CELSR2Q9HCU4 2923 aa11.02□□□□□ -0.64
HMGB2-205ENST00000511316 KIR2DS1A0A191URI9 304 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 OR6C6A6NF89 314 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 MPPED1O15442 326 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 PHF1O43189 567 aaPredicted RBP11.02□□□□□ -0.65
HMGB2-205ENST00000511316 XRCC2O43543 280 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 TK1P04183 234 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 KIR2DS4P43632 304 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 RPS23P62266 143 aaKnown RBP11.02□□□□□ -0.65
HMGB2-205ENST00000511316 IL24Q13007 206 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 KIAA0141Q14154 515 aaPredicted RBP11.02□□□□□ -0.65
HMGB2-205ENST00000511316 KIR2DS1Q14954 304 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 NRN1LQ496H8 165 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 AKR1C8PQ5T2L2 129 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 SLC22A25Q6T423 547 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 LYZL2Q7Z4W2 148 aa11.02□□□□□ -0.65
HMGB2-205ENST00000511316 ZNF695Q8IW36 515 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms