RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 AWAT2Q6E213 333 aa18.33■□□□□ 0.52
SNF8-209ENST00000510558 SLC16A12Q6ZSM3 486 aa18.33■□□□□ 0.52
SNF8-209ENST00000510558 CDH26Q8IXH8 852 aa18.33■□□□□ 0.52
SNF8-209ENST00000510558 THRSPQ92748 146 aa18.33■□□□□ 0.52
SNF8-209ENST00000510558 MRPS24Q96EL2 167 aaKnown RBP18.33■□□□□ 0.52
SNF8-209ENST00000510558 NKX1-2Q9UD57 310 aaPredicted RBP18.33■□□□□ 0.52
SNF8-209ENST00000510558 ADARB2-AS1A8MUL3 147 aa18.32■□□□□ 0.52
SNF8-209ENST00000510558 AMY1AP04745 511 aa18.32■□□□□ 0.52
SNF8-209ENST00000510558 AMY2AP04746 511 aa18.32■□□□□ 0.52
SNF8-209ENST00000510558 LPLP06858 475 aa18.32■□□□□ 0.52
SNF8-209ENST00000510558 FAM106CPP0CH98 169 aa18.32■□□□□ 0.52
SNF8-209ENST00000510558 MAPK3P27361 379 aaPredicted RBP18.32■□□□□ 0.52
SNF8-209ENST00000510558 ZNF497Q6ZNH5 498 aa18.32■□□□□ 0.52
SNF8-209ENST00000510558 CCDC107Q8WV48 283 aa18.32■□□□□ 0.52
SNF8-209ENST00000510558 ARL11Q969Q4 196 aa18.32■□□□□ 0.52
SNF8-209ENST00000510558 SPACA1Q9HBV2 294 aa18.32■□□□□ 0.52
SNF8-209ENST00000510558 RCC2Q9P258 522 aaKnown RBP18.32■□□□□ 0.52
SNF8-209ENST00000510558 A0A1W2PPI3 338 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A18PA6NE21 464 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A16PA6NEW6 464 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A20PA6NIJ5 464 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A9PA6NNJ1 464 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A12PA8MX19 464 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A5PA8MXJ8 464 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 C15orf65H3BRN8 121 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 CDK1P06493 297 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 SNRNP70P08621 437 aaKnown RBP18.31■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A15PP0C7V4 464 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A13PP0C7W8 464 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A14PP0C7W9 464 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A24PP0C7X0 464 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 DIAPH2-AS1Q14236 149 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 LYPD6Q86Y78 171 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 THNSL2Q86YJ6 484 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 NKAIN3Q8N8D7 197 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 OR5AU1Q8NGC0 362 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 OR10X1Q8NGY0 326 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 OR56B4Q8NH76 319 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 UBALD1Q8TB05 177 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 BANF2Q9H503 90 aa18.31■□□□□ 0.52
SNF8-209ENST00000510558 A0A1W2PPE3 182 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 SH2D7A6NKC9 451 aaPredicted RBP18.3■□□□□ 0.52
SNF8-209ENST00000510558 M0QZK8 103 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 AIPO00170 330 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 MT-ND4P03905 459 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 RAB7AP51149 207 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 C6orf141Q5SZD1 244 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 RNLSQ5VYX0 342 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 OR8H3Q8N146 312 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 DRAM1Q8N682 238 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 R3HDM4Q96D70 268 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 MND1Q9BWT6 205 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 MOB4Q9Y3A3 225 aa18.3■□□□□ 0.52
SNF8-209ENST00000510558 MCRIP1C9JLW8 97 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 PTGES3LE9PB15 166 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 G3V4G9 280 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 SDCBPO00560 298 aaPredicted RBP18.29■□□□□ 0.52
SNF8-209ENST00000510558 ORC5O43913 435 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 MGMTP16455 207 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 RAB12Q6IQ22 244 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 CENPVQ7Z7K6 275 aaPredicted RBP18.29■□□□□ 0.52
SNF8-209ENST00000510558 TMEM104Q8NE00 496 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 OR4F17Q8NGA8 305 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 OR52M1Q8NGK5 317 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 OR4F4Q96R69 305 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 UQCC2Q9BRT2 126 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 SELENOIQ9C0D9 397 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 GFOD1Q9NXC2 390 aa18.29■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A10PA6NDY2 464 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A7PA6NKC0 464 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 FAM90A23PA8MXZ1 464 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 CRTAPO75718 401 aaPredicted RBP18.28■□□□□ 0.52
SNF8-209ENST00000510558 AQP4P55087 323 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 CD83Q01151 205 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 GABPB1Q06547 395 aaPredicted RBP18.28■□□□□ 0.52
SNF8-209ENST00000510558 INSL4Q14641 139 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 C9orf152Q5JTZ5 239 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 MYDGFQ969H8 173 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 Q96M66 194 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 SCN3BQ9NY72 215 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 ETAA1Q9NY74 926 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 PEX16Q9Y5Y5 336 aa18.28■□□□□ 0.52
SNF8-209ENST00000510558 IGHV3-43A0A0B4J1X8 118 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 HSD17B6O14756 317 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 IGHV3-43DP0DP04 118 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 TMEM11P17152 192 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 LOXL3P58215 753 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 HES1Q14469 280 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 ACSM3Q53FZ2 586 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 FAM27D1Q5T7N8 215 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 SYT6Q5T7P8 510 aaPredicted RBP18.27■□□□□ 0.52
SNF8-209ENST00000510558 SAMD5Q5TGI4 173 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 FAM53AQ6NSI3 398 aaPredicted RBP18.27■□□□□ 0.52
SNF8-209ENST00000510558 UNQ9370/PRO34162Q6UXP9 181 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 MS4A15Q8N5U1 240 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 LINC00311Q8N616 119 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 NRG4Q8WWG1 115 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 SGCDQ92629 289 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 TRAPPC2LQ9UL33 140 aa18.27■□□□□ 0.52
SNF8-209ENST00000510558 LSM2Q9Y333 95 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms