RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 LAX1Q8IWV1 398 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 GAPTQ8N292 157 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 PRR18Q8N4B5 295 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 RFESDQ8TAC1 157 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 NANPQ8TBE9 248 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 C15orf40Q8WUR7 153 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 ARL11Q969Q4 196 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 DIRAS2Q96HU8 199 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 HDHD3Q9BSH5 251 aaPredicted RBP12.19□□□□□ -0.46
RNF4-213ENST00000509388 NXF2Q9GZY0 626 aaKnown RBP12.19□□□□□ -0.46
RNF4-213ENST00000509388 SIRPDQ9H106 197 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 AUNIPQ9H7T9 357 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 HEXA-AS1Q9H8Q6 139 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.19□□□□□ -0.46
RNF4-213ENST00000509388 SIRT7Q9NRC8 400 aa12.19□□□□□ -0.46
RNF4-213ENST00000509388 NAPSAO96009 420 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 RBP4P02753 201 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 RCC1P18754 421 aaPredicted RBP12.18□□□□□ -0.46
RNF4-213ENST00000509388 OMGP23515 440 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 PRTN3P24158 256 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 LTC4SQ16873 150 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 FAM120AOSQ5T036 256 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 NCR3LG1Q68D85 454 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 OR52W1Q6IF63 320 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 CNIH2Q6PI25 160 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 ZNF782Q6ZMW2 699 aaPredicted RBP12.18□□□□□ -0.46
RNF4-213ENST00000509388 UPRTQ96BW1 309 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 CYYR1Q96J86 154 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 BEX2Q9BXY8 128 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 MIXL1Q9H2W2 232 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 TAF9BQ9HBM6 251 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 TMEM160Q9NX00 188 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 IDI2-AS1Q9NZ38 188 aa12.18□□□□□ -0.46
RNF4-213ENST00000509388 TRBV6-6A0A0A6YYG2 114 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 C12orf77C9JDV5 145 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 AVPP01185 164 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 IGHV1-8P0DP01 117 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 MMP9P14780 707 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 NFYBP25208 207 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 PRSS3P35030 304 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 SSTR5P35346 364 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 DLX6P56179 175 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 MADCAM1Q13477 382 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 C17orf58Q2M2W7 97 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 PRAMEF5Q5TYX0 476 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 GPR157Q5UAW9 335 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 BAIAP2L2Q6UXY1 529 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 HEPN1Q6WQI6 88 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 ZNF554Q86TJ5 538 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 SNX29P2Q8IUI4 249 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 Q8N7P7 452 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 OR13D1Q8NGV5 346 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 NUDCD2Q8WVJ2 157 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 LHX4Q969G2 390 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 TBX15Q96SF7 602 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 ST6GALNAC5Q9BVH7 336 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 MBNL3Q9NUK0 354 aaKnown RBP12.17□□□□□ -0.46
RNF4-213ENST00000509388 ELF5Q9UKW6 265 aaPredicted RBP12.17□□□□□ -0.46
RNF4-213ENST00000509388 SESN1Q9Y6P5 492 aa12.17□□□□□ -0.46
RNF4-213ENST00000509388 FABP12A6NFH5 140 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 MELTFP08582 738 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 FCGR3AP08637 254 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 CGB3P0DN86 165 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 CGB7P0DN87 165 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 DTYMKP23919 212 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 COX7A1P24310 79 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 KIR2DS4P43632 304 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 CBX5P45973 191 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 GUCA2AQ02747 115 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 IL18Q14116 193 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 CNPY1Q3B7I2 92 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 PDZD9Q8IXQ8 264 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 C11orf42Q8N5U0 333 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 OR10A7Q8NGE5 316 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 UBALD1Q8TB05 177 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 IL1F10Q8WWZ1 152 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 GALMQ96C23 342 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 SUCNR1Q9BXA5 334 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 UNKLQ9H9P5 680 aaKnown RBP12.16□□□□□ -0.46
RNF4-213ENST00000509388 ZNF286AQ9HBT8 521 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 Q9N2K0 584 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 RABL2AQ9UBK7 228 aaPredicted RBP12.16□□□□□ -0.46
RNF4-213ENST00000509388 ZNF230Q9UIE0 474 aaPredicted RBP12.16□□□□□ -0.46
RNF4-213ENST00000509388 CDC42EP3Q9UKI2 254 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 RABL2BQ9UNT1 228 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 ABCA1O95477 2261 aa12.16□□□□□ -0.46
RNF4-213ENST00000509388 ACANP16112 2415 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 IGHV3OR16-10A0A075B7F0 116 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 TRAV40A0A0B4J280 105 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 TRDCB7Z8K6 153 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 NPIPB11E5RHQ5 1161 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 SDCBPO00560 298 aaPredicted RBP12.15□□□□□ -0.46
RNF4-213ENST00000509388 TOR1AO14656 332 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 TPPPO94811 219 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 HBZP02008 142 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 PTHLHP12272 177 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 FPR2P25090 351 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 TNFSF8P32971 234 aa12.15□□□□□ -0.46
RNF4-213ENST00000509388 HLA-DRB3P79483 266 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms