RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CITED2Q99967 270 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 TMED9Q9BVK6 235 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 IFT22Q9H7X7 185 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 PCDHB16Q9NRJ7 776 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 FKBP14Q9NWM8 211 aa11.84□□□□□ -0.51
UBE2D3-228ENST00000508974 A0A1W2PRX2 142 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 NPIPB11E5RHQ5 1161 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 AIPO00170 330 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 CRTAPO75718 401 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 CDK1P06493 297 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 SNRNP70P08621 437 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 HES1Q14469 280 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 PDLIM3Q53GG5 364 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 C6orf141Q5SZD1 244 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 FAM27D1Q5T7N8 215 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 LINC00596Q86U02 117 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 PRR18Q8N4B5 295 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 OR10X1Q8NGY0 326 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 ARL11Q969Q4 196 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 RBM14Q96PK6 669 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 MND1Q9BWT6 205 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 SELENOIQ9C0D9 397 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 NCOR1P1Q9H4R4 102 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 LIN7BQ9HAP6 207 aa11.83□□□□□ -0.52
UBE2D3-228ENST00000508974 ERICH4A6NGS2 130 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 SDCBPO00560 298 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 OR2F2O95006 317 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 MGMTP16455 207 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 MAPK3P27361 379 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 REG1BP48304 166 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 PAX5Q02548 391 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 MADCAM1Q13477 382 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 GPR176Q14439 515 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 HNF4GQ14541 408 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 MED22Q15528 200 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 RAB12Q6IQ22 244 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 ZNF497Q6ZNH5 498 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 C16orf82Q7Z2V1 217 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 DRAM1Q8N682 238 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 TMEM104Q8NE00 496 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 OR4K15Q8NH41 348 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 OCSTAMPQ9BR26 566 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 WNT10AQ9GZT5 417 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 SCN3BQ9NY72 215 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 ETAA1Q9NY74 926 aa11.82□□□□□ -0.52
UBE2D3-228ENST00000508974 PLXNB1O43157 2135 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 A0A1W2PPI3 338 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 UBE2QL1A1L167 161 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 OOSP1A8MZH6 123 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 MCRIP1C9JLW8 97 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 G3V4G9 280 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 ACSM3Q53FZ2 586 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 RBM48Q5RL73 367 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 CENPVQ7Z7K6 275 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 OR5AU1Q8NGC0 362 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 MYDGFQ969H8 173 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 R3HDM4Q96D70 268 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 KCNK15Q9H427 330 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 LINC00574Q9H8X3 128 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 TRAPPC2LQ9UL33 140 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 PEX16Q9Y5Y5 336 aa11.81□□□□□ -0.52
UBE2D3-228ENST00000508974 IGHV3-72A0A0B4J1Y9 119 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 C15orf65H3BRN8 121 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 HSD17B6O14756 317 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 MT-ND4P03905 459 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 AMY1AP04745 511 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 AMY2AP04746 511 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 CD1AP06126 327 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 FAM106CPP0CH98 169 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 TMEM11P17152 192 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 GZMHP20718 246 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 GP2P55259 537 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 GPR50Q13585 617 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 SPHARQ15513 63 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 SYT6Q5T7P8 510 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 C10orf99Q6UWK7 81 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 MOB3BQ86TA1 216 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 NKAIN3Q8N8D7 197 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 OR10A7Q8NGE5 316 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 OR10V1Q8NGI7 309 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 WIPF2Q8TF74 440 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 SPACA1Q9HBV2 294 aa11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 RCC2Q9P258 522 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 LSM2Q9Y333 95 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-228ENST00000508974 TGP01266 2768 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 ADARB2-AS1A8MUL3 147 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 C12orf77C9JDV5 145 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 CCRL2O00421 344 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 MPIG6BO95866 241 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 IGKV1D-33P01593 117 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 IGKV1-33P01594 117 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 OPN1MWP04001 364 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 HSMCR30P0CW71 290 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 OPN1MW2P0DN77 364 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 OPN1MW3P0DN78 364 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 RAB7AP51149 207 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 KHDC1LQ5JSQ8 128 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 NKAPLQ5M9Q1 402 aa11.79□□□□□ -0.52
UBE2D3-228ENST00000508974 LIPKQ5VXJ0 399 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms