RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 LAGE3Q14657 143 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF74Q16587 644 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 LRRC75BQ2VPJ9 315 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 MIDNQ504T8 468 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 AGTRAPQ6RW13 159 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 C12orf45Q8N5I9 185 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 OR13C4Q8NGS5 318 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 WFDC5Q8TCV5 224 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SLC35G5Q96KT7 338 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 PSMG3-AS1Q96PY0 264 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 PAXXQ9BUH6 204 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 GATA5Q9BWX5 397 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SLC25A22Q9H936 323 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 TRBV9A0A0B4J1U6 114 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 SNAP91O60641 907 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 NTN1O95631 604 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 HPRP00739 348 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 APODP05090 189 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 C1GALT1C1LP0DN25 315 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 PRLHRP49683 370 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 RBP2P50120 134 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 ART1P52961 327 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 PPP2CAP67775 309 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 CCL7P80098 99 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 NSDHLQ15738 373 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF658BQ4V348 819 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-209ENST00000508871 Q6ZRM9 215 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 HMGN2P46Q86SG4 172 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 KCNRGQ8N5I3 272 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 ZDHHC22Q8N966 263 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 OR4M1Q8NGD0 313 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 OR52E4Q8NGH9 312 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 NEIL3Q8TAT5 605 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 VOPP1Q96AW1 172 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 PGLYRP4Q96LB8 373 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 UBQLN4Q9NRR5 601 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 DLL3Q9NYJ7 618 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 FOXJ2Q9P0K8 574 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 ICAM5Q9UMF0 924 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 LAMTOR2Q9Y2Q5 125 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 UGT2A1Q9Y4X1 527 aa3.35□□□□□ -1.87
NEDD4-209ENST00000508871 TET1Q8NFU7 2136 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-209ENST00000508871 KNCNA6PVL3 124 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF705EA8MWA4 302 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-209ENST00000508871 ACTL6AO96019 429 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 T-ENOLP0DO92 83 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 CPMP14384 443 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 GATA1P15976 413 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-209ENST00000508871 P2RY4P51582 365 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 NCBP2P52298 156 aaKnown RBP eCLIP3.34□□□□□ -1.87
NEDD4-209ENST00000508871 ERVPABLB-1P60509 514 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM267Q0VDI3 215 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-209ENST00000508871 C16orf72Q14CZ0 275 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 RBMY1FQ15415 496 aaKnown RBP3.34□□□□□ -1.87
NEDD4-209ENST00000508871 SSX1Q16384 188 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 OR2B11Q5JQS5 317 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 ELP2Q6IA86 826 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 LCN10Q6JVE6 187 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 PWWP2BQ6NUJ5 590 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 C8orf82Q6P1X6 216 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-209ENST00000508871 C16orf82Q7Z2V1 217 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 LDLRAD3Q86YD5 345 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 APRG1Q8IVJ8 170 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 OR2V1Q8NHB1 315 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 THAP6Q8TBB0 222 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 SLC37A2Q8TED4 501 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 EBF4Q9BQW3 602 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 MED28Q9H204 178 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 SPNS1Q9H2V7 528 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 PRTFDC1Q9NRG1 225 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 KLHL21Q9UJP4 597 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 PCTPQ9UKL6 214 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 GXYLT2A0PJZ3 443 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 OR2M5A3KFT3 312 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 SLC22A1O15245 554 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 HAND1O96004 215 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 IGLV1-40P01703 118 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF705DP0CH99 300 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-209ENST00000508871 GLRXP35754 106 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 SSR4P51571 173 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 GPR50Q13585 617 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF672Q499Z4 452 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM97Q5BJF2 176 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 PDPNQ86YL7 162 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 HSD17B10Q99714 261 aaKnown RBP3.34□□□□□ -1.87
NEDD4-209ENST00000508871 SLC39A9Q9NUM3 307 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 SLC25A37Q9NYZ2 338 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 PXMP4Q9Y6I8 212 aa3.34□□□□□ -1.87
NEDD4-209ENST00000508871 SAP18O00422 153 aaKnown RBP3.34□□□□□ -1.88
NEDD4-209ENST00000508871 WNT11O96014 354 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 IFNA17P01571 189 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 WNT2P09544 360 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF83P51522 516 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 CLDN18P56856 261 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF284Q2VY69 593 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 FAM78AQ5JUQ0 283 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 OPN5Q6U736 354 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 C8orf31Q8N9H6 132 aa3.34□□□□□ -1.88
NEDD4-209ENST00000508871 OR10G9Q8NGN4 311 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms