RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 Q6ZTK2 550 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 TCF23Q7RTU1 214 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 ANKRD13BQ86YJ7 626 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 PDZD9Q8IXQ8 264 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 GAPTQ8N292 157 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 PNKDQ8N490 385 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 C11orf42Q8N5U0 333 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 TMEM86BQ8N661 226 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 OR52M1Q8NGK5 317 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 PLPPR1Q8TBJ4 325 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 MRGPRDQ8TDS7 321 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 SSMEM1Q8WWF3 244 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 C22orf15Q8WYQ4 148 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 TMEM158Q8WZ71 300 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 RAB3CQ96E17 227 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 LINC00574Q9H8X3 128 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 C12orf4Q9NQ89 552 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 ABRACLQ9P1F3 81 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 AMMECR1Q9Y4X0 333 aaPredicted RBP7.47□□□□□ -1.21
NUP54-207ENST00000508583 POMT1Q9Y6A1 747 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 MINOS1-NBL1R4GNA1 71 aa7.47□□□□□ -1.21
NUP54-207ENST00000508583 A0A087X0M5 115 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 IGHV2-26A0A0B4J1V2 119 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 A0A1B0GX30 115 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 UBE2QL1A1L167 161 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 ARG1P05089 322 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 CD3GP09693 182 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 CD34P28906 385 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 ALDH3B2P48448 385 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 SERPINB10P48595 397 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 BAMBIQ13145 260 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 KLRD1Q13241 179 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 AANATQ16613 207 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 TUSC1Q2TAM9 212 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 PRAMEF5Q5TYX0 476 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 ZNF626Q68DY1 528 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 SIGIRRQ6IA17 410 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 C6orf201Q7Z4U5 140 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 PRIMA1Q86XR5 153 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 ABHD12Q8N2K0 398 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 SIGLECL1Q8N7X8 197 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 BEND2Q8NDZ0 799 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 OR13A1Q8NGR1 328 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 OR10R2Q8NGX6 335 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 OR5R1Q8NH85 324 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 RAB2BQ8WUD1 216 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 AP3S1Q92572 193 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 ARL11Q969Q4 196 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 SLC25A46Q96AG3 418 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 MALSU1Q96EH3 234 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 NICN1Q9BSH3 213 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 ATG5Q9H1Y0 275 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 MBNL3Q9NUK0 354 aaKnown RBP7.46□□□□□ -1.22
NUP54-207ENST00000508583 IDI2-AS1Q9NZ38 188 aa7.46□□□□□ -1.22
NUP54-207ENST00000508583 TRBV6-6A0A0A6YYG2 114 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 A0A0U1RQK1 487 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 SMIM30A4D0T7 59 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 NPIPB11E5RHQ5 1161 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 SDCBPO00560 298 aaPredicted RBP7.45□□□□□ -1.22
NUP54-207ENST00000508583 SOCS1O15524 211 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 RGS11O94810 467 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 TFAP2AP05549 437 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 LPLP06858 475 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 SLC2A2P11168 524 aaPredicted RBP7.45□□□□□ -1.22
NUP54-207ENST00000508583 HIST1H1DP16402 221 aaKnown RBP7.45□□□□□ -1.22
NUP54-207ENST00000508583 NFYBP25208 207 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 IL3RAP26951 378 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 HTR1DP28221 377 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 SSTR5P35346 364 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 TALDO1P37837 337 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 RORCP51449 518 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 RPL15P61313 204 aaKnown RBP7.45□□□□□ -1.22
NUP54-207ENST00000508583 LSM3P62310 102 aaKnown RBP7.45□□□□□ -1.22
NUP54-207ENST00000508583 PITPNAQ00169 270 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 C17orf58Q2M2W7 97 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 DEFB112Q30KQ8 113 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 GPR107Q5VW38 600 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 STEAP3Q658P3 488 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 RUSC1-AS1Q66K80 236 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 CCDC144NLQ6NUI1 221 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 BRICD5Q6PL45 260 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 Q6YL49 198 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 NR2C2APQ86WQ0 139 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 LDLRAD3Q86YD5 345 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 OR9G1Q8NH87 305 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 NDNFQ8TB73 568 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 LGALS14Q8TCE9 139 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 CCDC107Q8WV48 283 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 ACOT12Q8WYK0 555 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 GALMQ96C23 342 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 ARHGAP5-AS1Q96IT6 56 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 KIRREL1Q96J84 757 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 CMSS1Q9BQ75 279 aaKnown RBP7.45□□□□□ -1.22
NUP54-207ENST00000508583 SULT4A1Q9BR01 284 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 FAAP24Q9BTP7 215 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 KCNK15Q9H427 330 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 RNF167Q9H6Y7 350 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 DIABLOQ9NR28 239 aa7.45□□□□□ -1.22
NUP54-207ENST00000508583 RHBDL2Q9NX52 303 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms