RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 ETV7Q9Y603 341 aa7.25□□□□□ -1.25
SCAMP1-202ENST00000506858 IGKV1D-8A0A087WSZ0 117 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 IGHV3-43A0A0B4J1X8 118 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 A0A0G2JMP0 313 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 A0A0X1KG70 313 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 TMEM30CPA0ZSE6 113 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 A6NJY4 79 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 A8MV72 311 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 INAFM1C9JVW0 142 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 MFNGO00587 321 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 SSX5O60225 188 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 ECDO95905 644 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 LIPFP07098 398 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 ZNF728P0DKX0 622 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 IGHV3-43DP0DP04 118 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 IGHV4-38-2P0DP08 117 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 COX7A1P24310 79 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 ARFRP1Q13795 201 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 C17orf58Q2M2W7 97 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 CNPY1Q3B7I2 92 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 ZNF260Q3ZCT1 412 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 ARSJQ5FYB0 599 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 UBE2NLQ5JXB2 153 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 SLC35E4Q6ICL7 350 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 BTNL3Q6UXE8 466 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 SNX29P2Q8IUI4 249 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 OR4M2Q8NGB6 313 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 OR1L1Q8NH94 360 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 C8orf46Q8TAG6 207 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 C22orf15Q8WYQ4 148 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 LHX4Q969G2 390 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 PTX4Q96A99 478 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 S100A16Q96FQ6 103 aaKnown RBP7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 CMSS1Q9BQ75 279 aaKnown RBP7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 SIRPDQ9H106 197 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 ABCG5Q9H222 651 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 SPACA1Q9HBV2 294 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 CHMP1AQ9HD42 196 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 NDUFA13Q9P0J0 144 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 EXTL2Q9UBQ6 330 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 TRAPPC2LQ9UL33 140 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 KCNS2Q9ULS6 477 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 POLR3KQ9Y2Y1 108 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 NF1P21359 2839 aa7.24□□□□□ -1.25
SCAMP1-202ENST00000506858 TRGV10A0A0A0MS01 117 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 TRBV23-1A0A0A0MS06 115 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 hADV38S2A0JD32 116 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 MEIOCA2RUB1 952 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 C12orf77C9JDV5 145 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 ZNF701M0R085 212 aaPredicted RBP7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 CLPXO76031 633 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 TOX4O94842 621 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 HLA-DQB1P01920 261 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 APOA1P02647 267 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 CSN2P05814 226 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 CD3GP09693 182 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 MMP9P14780 707 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 NFYBP25208 207 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 ERP29P30040 261 aaKnown RBP7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 TAS2R20P59543 309 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 RBM39Q14498 530 aaKnown RBP7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 KLF17Q5JT82 389 aaPredicted RBP7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 TMEM69Q5SWH9 247 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 FAM120AOSQ5T036 256 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 RUSC1-AS1Q66K80 236 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 MZT2AQ6P582 158 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 CNIH2Q6PI25 160 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 VMO1Q7Z5L0 202 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 GVQW1Q8N7I0 195 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 ACOT12Q8WYK0 555 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 AP3S1Q92572 193 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 ARL11Q969Q4 196 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 WDFY2Q96P53 400 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 MRI1Q9BV20 369 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 NXF2Q9GZY0 626 aaKnown RBP7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 AUNIPQ9H7T9 357 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 AUP1Q9Y679 476 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 A0A1W2PPE3 182 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 RNASEK-C17orf49H0YIS7 233 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 XRCC3O43542 346 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 NAPSAO96009 420 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 SCTP09683 121 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 CGB3P0DN86 165 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 CGB7P0DN87 165 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 FOSL1P15407 271 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 TNFSF8P32971 234 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 MEF2CQ06413 473 aaPredicted RBP7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 HCP5Q6MZN7 132 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 BRD3OSQ6XYD6 125 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 BCL6BQ8N143 479 aaPredicted RBP7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 OR10V1Q8NGI7 309 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 PHF21AQ96BD5 680 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 RBMXL1Q96E39 390 aaKnown RBP7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 ZNF714Q96N38 554 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 ST6GALNAC5Q9BVH7 336 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 SUCNR1Q9BXA5 334 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 TAF9BQ9HBM6 251 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 DIABLOQ9NR28 239 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 CALYQ9NYX4 217 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms