RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 OPN1MWP04001 364 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 OPN1MW2P0DN77 364 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 OPN1MW3P0DN78 364 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 CD28P10747 220 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 GTF2F2P13984 249 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 CELP19835 753 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 GZMHP20718 246 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 NFYBP25208 207 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 SSTR5P35346 364 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 ARHGDIBP52566 201 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 GP2P55259 537 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 GPR176Q14439 515 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 TMEM95Q3KNT9 176 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 SLC22A6Q4U2R8 563 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 UNQ9370/PRO34162Q6UXP9 181 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 ZNF497Q6ZNH5 498 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 SLC16A12Q6ZSM3 486 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 REC114Q7Z4M0 266 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 THNSL2Q86YJ6 484 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 GAPTQ8N292 157 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 STX19Q8N4C7 294 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 RFESDQ8TAC1 157 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 THRSPQ92748 146 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 LEAP2Q969E1 77 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 MUL1Q969V5 352 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 MRPS24Q96EL2 167 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 AKR1E2Q96JD6 320 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 RBM14Q96PK6 669 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 S100A13Q99584 98 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 SLC25A33Q9BSK2 321 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 VCXQ9H320 206 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 PCDHB16Q9NRJ7 776 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 MRPS28Q9Y2Q9 187 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 LSM2Q9Y333 95 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 AMMECR1Q9Y4X0 333 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 TGP01266 2768 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 PLXNB1O43157 2135 aa7.24□□□□□ -1.25
PDLIM5-209ENST00000506632 TRAV39A0A0B4J263 110 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 TMEM30CPA0ZSE6 113 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 FAM90A10PA6NDY2 464 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 FAM90A7PA6NKC0 464 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 FAM90A23PA8MXZ1 464 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 ORC5O43913 435 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 SC5DO75845 299 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 IGHV3-7P01780 117 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 MT-ND4P03905 459 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 CDK1P06493 297 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 MAPK3P27361 379 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 MNDAP41218 407 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 VDAC2P45880 294 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 LOXL3P58215 753 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 CD83Q01151 205 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 MADCAM1Q13477 382 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 DIAPH2-AS1Q14236 149 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 RBM39Q14498 530 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 C6orf141Q5SZD1 244 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 GLIPR1L1Q6UWM5 242 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 NDUFA11Q86Y39 141 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 JAGN1Q8N5M9 183 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 LINC00311Q8N616 119 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 C8orf31Q8N9H6 132 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 OR52M1Q8NGK5 317 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 NRG4Q8WWG1 115 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 TOMM40LQ969M1 308 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 RPEQ96AT9 228 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 Q96M66 194 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 OR5M11Q96RB7 305 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 CITED2Q99967 270 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 SPACA1Q9HBV2 294 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 ERGIC3Q9Y282 383 aa7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 PRKDCP78527 4128 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-209ENST00000506632 M0QZK8 103 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 BPNT1O95861 308 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 MAS1P04201 325 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 SNRNP70P08621 437 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 CD37P11049 281 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 RAB7AP51149 207 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 AQP4P55087 323 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 SLC35A2P78381 396 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 EMX1Q04741 257 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 ZNF816Q0VGE8 651 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 INSL4Q14641 139 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 IRF3Q14653 427 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 Q3ZCU0 254 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 ABCA11PQ4W5N1 156 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 TCTEX1D4Q5JR98 221 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 ATAD3CQ5T2N8 411 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 KPRPQ5T749 579 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 AWAT2Q6E213 333 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 SIGIRRQ6IA17 410 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 OR8H3Q8N146 312 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 LYG1Q8N1E2 194 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 MS4A15Q8N5U1 240 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 NKAIN3Q8N8D7 197 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 TMEM104Q8NE00 496 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 SGCDQ92629 289 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 ARL11Q969Q4 196 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 UQCC2Q9BRT2 126 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 MND1Q9BWT6 205 aa7.22□□□□□ -1.25
PDLIM5-209ENST00000506632 GFOD1Q9NXC2 390 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms