RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 ING4Q9UNL4 249 aa11.48□□□□□ -0.57
SEC24D-208ENST00000506622 TMEM30CPA0ZSE6 113 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 CCL24O00175 119 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 CDRT1O95170 752 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 VSIG8P0DPA2 414 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 GABRB1P18505 474 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 REG1BP48304 166 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 EBI3Q14213 229 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 PNLIPRP3Q17RR3 467 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 CBR4Q8N4T8 237 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 RHOXF1Q8NHV9 184 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 GPR148Q8TDV2 347 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 TFAP2CQ92754 450 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 ARL11Q969Q4 196 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 EAF1Q96JC9 268 aaPredicted RBP11.47□□□□□ -0.57
SEC24D-208ENST00000506622 JAM3Q9BX67 310 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 METTL9Q9H1A3 318 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 LIN7CQ9NUP9 197 aaKnown RBP11.47□□□□□ -0.57
SEC24D-208ENST00000506622 TAS2R4Q9NYW5 299 aa11.47□□□□□ -0.57
SEC24D-208ENST00000506622 SORL1Q92673 2214 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 IGHV3-72A0A0B4J1Y9 119 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 LINC01548A6NM66 108 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 H0YHG0 523 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 SDCBPO00560 298 aaPredicted RBP11.46□□□□□ -0.57
SEC24D-208ENST00000506622 RAMP3O60896 148 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 IL3RAP26951 378 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 GPR12P47775 334 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 GTF2A1P52655 376 aaPredicted RBP11.46□□□□□ -0.57
SEC24D-208ENST00000506622 KLHL22Q53GT1 634 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 IZUMO1Q8IYV9 350 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 OR52M1Q8NGK5 317 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 OR52I1Q8NGK6 324 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 OR52N1Q8NH53 320 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 RAX2Q96IS3 184 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 DUX3Q96PT4 197 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 ABCG5Q9H222 651 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 IFT22Q9H7X7 185 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 TMEM138Q9NPI0 162 aa11.46□□□□□ -0.57
SEC24D-208ENST00000506622 PAK1IP1Q9NWT1 392 aaPredicted RBP11.46□□□□□ -0.57
SEC24D-208ENST00000506622 RPL36Q9Y3U8 105 aaKnown RBP11.46□□□□□ -0.57
SEC24D-208ENST00000506622 GEMIN2O14893 280 aaKnown RBP11.45□□□□□ -0.58
SEC24D-208ENST00000506622 RRP9O43818 475 aaKnown RBP11.45□□□□□ -0.58
SEC24D-208ENST00000506622 RPLP1P05386 114 aaKnown RBP11.45□□□□□ -0.58
SEC24D-208ENST00000506622 NHLRC4P0CG21 123 aaPredicted RBP11.45□□□□□ -0.58
SEC24D-208ENST00000506622 ZNF93P35789 620 aaPredicted RBP11.45□□□□□ -0.58
SEC24D-208ENST00000506622 RBM11P57052 281 aaKnown RBP11.45□□□□□ -0.58
SEC24D-208ENST00000506622 PPP3R1P63098 170 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 GPR50Q13585 617 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 CXorf66Q5JRM2 361 aaPredicted RBP11.45□□□□□ -0.58
SEC24D-208ENST00000506622 NHLRC3Q5JS37 347 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 ATAD3CQ5T2N8 411 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 ZFP1Q6P2D0 407 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 LINC00596Q86U02 117 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 LINC00311Q8N616 119 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 C8orf31Q8N9H6 132 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 OR8U1Q8NH10 309 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 NEK7Q8TDX7 302 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 CCDC107Q8WV48 283 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 TMEM106AQ96A25 262 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 RASL11BQ9BPW5 248 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 DCLRE1BQ9H816 532 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 FAM53CQ9NYF3 392 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 IL36GQ9NZH8 169 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 ZNF581Q9P0T4 197 aa11.45□□□□□ -0.58
SEC24D-208ENST00000506622 ORC5O43913 435 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 ZNF780AO75290 641 aaPredicted RBP11.44□□□□□ -0.58
SEC24D-208ENST00000506622 MOSP00540 346 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 SERPINA2P20848 420 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 CD1BP29016 333 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 CDX1P47902 265 aaPredicted RBP11.44□□□□□ -0.58
SEC24D-208ENST00000506622 MPV17LQ2QL34 196 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 CCDC58Q4VC31 144 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 DDI2Q5TDH0 399 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 RPL22L1Q6P5R6 122 aaKnown RBP11.44□□□□□ -0.58
SEC24D-208ENST00000506622 STX19Q8N4C7 294 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 Q8N6K4 173 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 Q8N9W7 124 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 OR5M8Q8NGP6 311 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 UBALD1Q8TB05 177 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 RTN4IP1Q8WWV3 396 aaPredicted RBP11.44□□□□□ -0.58
SEC24D-208ENST00000506622 RGP1Q92546 391 aaPredicted RBP11.44□□□□□ -0.58
SEC24D-208ENST00000506622 MRPS18AQ9NVS2 196 aaKnown RBP11.44□□□□□ -0.58
SEC24D-208ENST00000506622 GFOD1Q9NXC2 390 aa11.44□□□□□ -0.58
SEC24D-208ENST00000506622 LOC100130705A0A1B0GUX0 176 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 H3BNX3 289 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 C15orf65H3BRN8 121 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 ELANEP08246 267 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 LIMS3P0CW19 117 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 LIMS4P0CW20 117 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 GTF2F2P13984 249 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 BDKRB2P30411 391 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 FOXE3Q13461 319 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 KIR2DS1Q14954 304 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 DEFB136Q30KP8 78 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 C9orf66Q5T8R8 295 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 LCNL1Q6ZST4 164 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 C10orf67Q8IYJ2 551 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 OR8H1Q8NGG4 311 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 S1PR3Q99500 378 aa11.43□□□□□ -0.58
SEC24D-208ENST00000506622 C9orf16Q9BUW7 83 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms