RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 RWDD2BP57060 319 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 RAB38P57729 211 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 ESRRGP62508 458 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 BTG2P78543 158 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 SYCNQ0VAF6 134 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 QPRTQ15274 297 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 SPA17Q15506 151 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 TMEM249Q2WGJ8 235 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 ZNF791Q3KP31 576 aaPredicted RBP3.57□□□□□ -1.84
HERC4-213ENST00000506515 ORMDL2Q53FV1 153 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 FAM71E1Q6IPT2 247 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 VN1R4Q7Z5H5 301 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 BBOF1Q8ND07 529 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 OR10AD1Q8NGE0 317 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 OR8K1Q8NGG5 319 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 OR1J4Q8NGS1 313 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 ACTL9Q8TC94 416 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 ZNF418Q8TF45 676 aaPredicted RBP3.57□□□□□ -1.84
HERC4-213ENST00000506515 MED12Q93074 2177 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 TSLPQ969D9 159 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 MRGPRFQ96AM1 343 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 RBMXL1Q96E39 390 aaKnown RBP3.57□□□□□ -1.84
HERC4-213ENST00000506515 GALNT14Q96FL9 552 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 ZNF430Q9H8G1 570 aaPredicted RBP3.57□□□□□ -1.84
HERC4-213ENST00000506515 LYRM4Q9HD34 91 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 SDHAF3Q9NRP4 125 aa3.57□□□□□ -1.84
HERC4-213ENST00000506515 IGLV1-50A0A075B6I6 118 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 hCG_1818297A0A087WSY0 165 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 KBTBD11-OT1A0A1B0GTJ5 212 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 IQCF5A8MTL0 148 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 USF1P22415 310 aaPredicted RBP3.56□□□□□ -1.84
HERC4-213ENST00000506515 HIST1H1TP22492 207 aaPredicted RBP3.56□□□□□ -1.84
HERC4-213ENST00000506515 SERPINB1P30740 379 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 RPL22P35268 128 aaKnown RBP3.56□□□□□ -1.84
HERC4-213ENST00000506515 SRP14P37108 136 aaKnown RBP3.56□□□□□ -1.84
HERC4-213ENST00000506515 SLC1A2P43004 574 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 P2RX1P51575 399 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 PPP1CBP62140 327 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 BTN3A2P78410 334 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 AGTRAPQ6RW13 159 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 ST13P4Q8IZP2 240 aaPredicted RBP3.56□□□□□ -1.84
HERC4-213ENST00000506515 SYCE1Q8N0S2 351 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 KRT222Q8N1A0 295 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 UBL4BQ8N7F7 174 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 CNEP1R1Q8N9A8 125 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 CHST4Q8NCG5 386 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 BPIFCQ8NFQ6 507 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 OR52E2Q8NGJ4 325 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 UBALD1Q8TB05 177 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 NAT14Q8WUY8 206 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 MUCL1Q96DR8 90 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 ZNF382Q96SR6 550 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 UGT2B28Q9BY64 529 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 TMEM38AQ9H6F2 299 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 AUNIPQ9H7T9 357 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 HMG20AQ9NP66 347 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 CYTL1Q9NRR1 136 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 ZNF355PQ9NSJ1 428 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 TAS2R13Q9NYV9 303 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 CLN8Q9UBY8 286 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 PSME2Q9UL46 239 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 C15orf41Q9Y2V0 281 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 YTHDF2Q9Y5A9 579 aaKnown RBP3.56□□□□□ -1.84
HERC4-213ENST00000506515 ALPK2Q86TB3 2170 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 MED12LQ86YW9 2145 aa3.56□□□□□ -1.84
HERC4-213ENST00000506515 ANK3Q12955 4377 aaKnown RBP3.55□□□□□ -1.84
HERC4-213ENST00000506515 TGP01266 2768 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 SLC22A20A6NK97 555 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 NCBP2LA6PVI3 153 aaKnown RBP3.55□□□□□ -1.84
HERC4-213ENST00000506515 GOLGA6L19H0YKK7 550 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 CCL22O00626 93 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 ACOX3O15254 700 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 FOXH1O75593 365 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 ADRA2AP08913 450 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 MRPL3P09001 348 aaKnown RBP3.55□□□□□ -1.84
HERC4-213ENST00000506515 CCL3P10147 92 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 CSNK2A2P19784 350 aaPredicted RBP3.55□□□□□ -1.84
HERC4-213ENST00000506515 RAB3AP20336 220 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 IMPA1P29218 277 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 SSTR5P35346 364 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 CTBP2P56545 445 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 RAB8AP61006 207 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 ZNF266Q14584 549 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 CCSMST1Q4G0I0 132 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 ACSBG2Q5FVE4 666 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 ZNF470Q6ECI4 717 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 NPSR1Q6W5P4 371 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 MBOAT2Q6ZWT7 520 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 ABHD12BQ7Z5M8 362 aaPredicted RBP3.55□□□□□ -1.84
HERC4-213ENST00000506515 CA13Q8N1Q1 262 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 CBR4Q8N4T8 237 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 OR7G1Q8NGA0 311 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 OR5T3Q8NGG3 340 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 OR52K1Q8NGK4 314 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 OR6K3Q8NGY3 331 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 OR51E1Q8TCB6 317 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 PIFOQ8TCI5 191 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 RILPQ96NA2 401 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 BIRC8Q96P09 236 aa3.55□□□□□ -1.84
HERC4-213ENST00000506515 TIMM17AQ99595 171 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms