RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 GLT6D1Q7Z4J2 308 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 CALHM1Q8IU99 346 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 PGAM4Q8N0Y7 254 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF567Q8N184 647 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 C2orf73Q8N5S3 287 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 Q8N7P7 452 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 C19orf18Q8NEA5 215 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR4K2Q8NGD2 314 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR13C4Q8NGS5 318 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 LILRB4Q8NHJ6 448 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 LGALS14Q8TCE9 139 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 C15orf40Q8WUR7 153 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 LCN9Q8WX39 176 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 TMEM234Q8WY98 164 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 CDKL2Q92772 493 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 FAM104AQ969W3 186 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 RDH12Q96NR8 316 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 RNF157Q96PX1 679 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF382Q96SR6 550 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 SULT4A1Q9BR01 284 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 ULBP2Q9BZM5 246 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 UCK1Q9HA47 277 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 FAM60AQ9NP50 221 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 STMN3Q9NZ72 180 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF229Q9UJW7 825 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF223Q9UK11 482 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 FARSAQ9Y285 508 aaKnown RBP2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF257Q9Y2Q1 563 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 NAV3Q8IVL0 2385 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 CHD5Q8TDI0 1954 aa2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 PRRC2CQ9Y520 2896 aaKnown RBP2.1□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF106Q9H2Y7 1883 aaKnown RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 PRRC2AP48634 2157 aaKnown RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 DOCK4Q8N1I0 1966 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 IGLV4-69A0A075B6H9 119 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 hCG_1818297A0A087WSY0 165 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 MGAT4DA6NG13 374 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 C9J4A7 227 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 E7EQ34 232 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 LINC01619G3V211 115 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 C19orf84I3L1E1 186 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 TNFRSF11BO00300 401 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 TAAR5O14804 337 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 MYL12BO14950 172 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 TOX3O15405 576 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 CST8O60676 142 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 REM1O75628 298 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 KLF7O75840 302 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR2B3O76000 313 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 YIF1AO95070 293 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 NPPAP01160 153 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 SLC35G6P0C7Q6 338 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 UGT2B7P16662 529 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 MAGP20916 626 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 PSMB5P28074 263 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 PEBP1P30086 187 aaKnown RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 LCN1P31025 176 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF140P52738 457 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 RPL26P61254 145 aaKnown RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 ESRRGP62508 458 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 SLC35A1P78382 337 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 CRADDP78560 199 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 IFITM3Q01628 133 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 DMTNQ08495 405 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 MADCAM1Q13477 382 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 NAB1Q13506 487 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 POU6F1Q14863 301 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 PDK2Q15119 407 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 RBMY1FQ15415 496 aaKnown RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR1Q1Q15612 314 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 USF2Q15853 346 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 TAL2Q16559 108 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 NDUFAF6Q330K2 333 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 CCSMST1Q4G0I0 132 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 SMUG1Q53HV7 270 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 MPV17L2Q567V2 206 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 PDPK2PQ6A1A2 396 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 PPP1R2P3Q6NXS1 205 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 MDP1Q86V88 176 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 CDKL3Q8IVW4 592 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 SYCE1Q8N0S2 351 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 OR1S1Q8NH92 325 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 RXFP4Q8TDU9 374 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 CCDC124Q96CT7 223 aaKnown RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 QKIQ96PU8 341 aaKnown RBP eCLIP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 NDFIP1Q9BT67 221 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 TMEM243Q9BU79 118 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 KRTAP4-3Q9BYR4 195 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 CHRNA10Q9GZZ6 450 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 C12orf10Q9HB07 376 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 VAPAQ9P0L0 249 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 ZNF222Q9UK12 451 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 RPL26L1Q9UNX3 145 aaKnown RBP2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 BTRCQ9Y297 605 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 KLF12Q9Y4X4 402 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 ADGRG4Q8IZF6 3080 aa2.09□□□□□ -2.07
TRAPPC11-205ENST00000506426 CELSR2Q9HCU4 2923 aa2.09□□□□□ -2.08
TRAPPC11-205ENST00000506426 HIVEP3Q5T1R4 2406 aa2.09□□□□□ -2.08
TRAPPC11-205ENST00000506426 UNC13CQ8NB66 2214 aa2.09□□□□□ -2.08
TRAPPC11-205ENST00000506426 HIVEP1P15822 2718 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms