RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 NUDT22Q9BRQ3 303 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 PCED1AQ9H1Q7 454 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 SOHLH2Q9NX45 425 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 ZNF391Q9UJN7 358 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 TIMM9Q9Y5J7 89 aa13.7□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A10PA6NDY2 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A18PA6NE21 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A16PA6NEW6 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 LILRA5A6NI73 299 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A20PA6NIJ5 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A8PA6NJQ4 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A7PA6NKC0 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A22PA8MWA6 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A12PA8MX19 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A5PA8MXJ8 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A23PA8MXZ1 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 H0Y980 276 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 WNT2P09544 360 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 CTXN2P0C2S0 81 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A15PP0C7V4 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A13PP0C7W8 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A14PP0C7W9 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FAM90A24PP0C7X0 464 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 CD99P14209 185 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 GNRHRP30968 328 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 FASLGP48023 281 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 PAX9P55771 341 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 RPL23P62829 140 aaKnown RBP13.69□□□□□ -0.22
SCLT1-208ENST00000506368 HBG1P69891 147 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 HBG2P69892 147 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 C10orf128Q5T292 105 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 TECTBQ96PL2 329 aa13.69□□□□□ -0.22
SCLT1-208ENST00000506368 POLR3KQ9Y2Y1 108 aaPredicted RBP13.69□□□□□ -0.22
SCLT1-208ENST00000506368 TMEM50AO95807 157 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 TCN2P20062 427 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 EFNA3P52797 238 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 MFAP5Q13361 173 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 NSDHLQ15738 373 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 SPEM1Q8N4L4 309 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 PLPPR1Q8TBJ4 325 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 RNF138Q8WVD3 245 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 REPIN1Q9BWE0 567 aaKnown RBP13.68□□□□□ -0.22
SCLT1-208ENST00000506368 MANBALQ9NQG1 85 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 E9PLN8 166 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 ZNF737O75373 536 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 CNOT4O95628 575 aaKnown RBP13.68□□□□□ -0.22
SCLT1-208ENST00000506368 GLI4P10075 376 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 GABRG2P18507 467 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 LCN15Q6UWW0 184 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 OR13H1Q8NG92 308 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 BORCS8Q96FH0 119 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 MIEN1Q9BRT3 115 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 FUT9Q9Y231 359 aa13.68□□□□□ -0.22
SCLT1-208ENST00000506368 PCNX3Q9H6A9 2034 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 IGLV3-32A0A0A0MS00 114 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 LRP5LA4QPB2 252 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 H3BML4 177 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 M0R135 149 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 TUBG1P23258 451 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 PSMB3P49720 205 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 PAFAH1B2P68402 229 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 MRPS11P82912 194 aaKnown RBP13.67□□□□□ -0.22
SCLT1-208ENST00000506368 ZNF92Q03936 586 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 SHBQ15464 509 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 LRRC75BQ2VPJ9 315 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 ZNF799Q96GE5 643 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 ZNF318Q5VUA4 2279 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 F5H5K5 113 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 K7ESF4 209 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 TNFSF13O75888 250 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 GZMHP20718 246 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 ANOS1P23352 680 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 CXCL12P48061 93 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 ERVS71-1P61550 626 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 MRPS34P82930 218 aaKnown RBP13.67□□□□□ -0.22
SCLT1-208ENST00000506368 ZNF726P1Q15940 193 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 NKAIN1Q4KMZ8 207 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 SFTPA2Q8IWL1 248 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 SLC22A18ASQ8N1D0 253 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 TSTD1Q8NFU3 115 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 RLN3Q8WXF3 142 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 ZCCHC14Q8WYQ9 949 aaKnown RBP13.67□□□□□ -0.22
SCLT1-208ENST00000506368 PCGF1Q9BSM1 259 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 OPN3Q9H1Y3 402 aaPredicted RBP13.67□□□□□ -0.22
SCLT1-208ENST00000506368 RBKSQ9H477 322 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 SDK1Q7Z5N4 2213 aa13.67□□□□□ -0.22
SCLT1-208ENST00000506368 SPTY2D1-AS1A0A0U1RR47 76 aa13.66□□□□□ -0.22
SCLT1-208ENST00000506368 A0A1W2PPQ1 181 aa13.66□□□□□ -0.22
SCLT1-208ENST00000506368 DLL1O00548 723 aa13.66□□□□□ -0.22
SCLT1-208ENST00000506368 HPRT1P00492 218 aa13.66□□□□□ -0.22
SCLT1-208ENST00000506368 SPIN3Q5JUX0 258 aa13.66□□□□□ -0.22
SCLT1-208ENST00000506368 TMEM37Q8WXS4 190 aa13.66□□□□□ -0.22
SCLT1-208ENST00000506368 CHODLQ9H9P2 273 aa13.66□□□□□ -0.22
SCLT1-208ENST00000506368 AQP7P3A6NL99 342 aa13.65□□□□□ -0.22
SCLT1-208ENST00000506368 ATXN7O15265 892 aaPredicted RBP13.65□□□□□ -0.22
SCLT1-208ENST00000506368 MDKP21741 143 aaPredicted RBP13.65□□□□□ -0.22
SCLT1-208ENST00000506368 FBLP22087 321 aaKnown RBP13.65□□□□□ -0.22
SCLT1-208ENST00000506368 C1orf210Q8IVY1 113 aa13.65□□□□□ -0.22
SCLT1-208ENST00000506368 CARFQ8N187 725 aa13.65□□□□□ -0.22
SCLT1-208ENST00000506368 MS4A10Q96PG2 267 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms