RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 TCTEX1D1Q8N7M0 179 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 OR1L3Q8NH93 324 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 TMEM174Q8WUU8 243 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 IGFBPL1Q8WX77 278 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 PLEKHB2Q96CS7 222 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 ATOH8Q96SQ7 321 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 PITPNM3Q9BZ71 974 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 PRTFDC1Q9NRG1 225 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 RBFOX1Q9NWB1 397 aaKnown RBP5.78□□□□□ -1.48
CDH9-202ENST00000505020 MYH15Q9Y2K3 1946 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 SSH2Q76I76 1423 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 CARMIL3Q8ND23 1372 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 DUXBA0A1W2PPF3 345 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 C9JAW5 83 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 H7C417 338 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 ZNF354AO60765 605 aaPredicted RBP5.78□□□□□ -1.48
CDH9-202ENST00000505020 SPAG7O75391 227 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 UPK1BO75841 260 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 AIFM1O95831 613 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 SERPINE1P05121 402 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 CD55P08174 381 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 CASP1P29466 404 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 PRSS3P35030 304 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 GPR6P46095 362 aaPredicted RBP5.78□□□□□ -1.48
CDH9-202ENST00000505020 LHX2P50458 406 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 RPS25P62851 125 aaKnown RBP5.78□□□□□ -1.48
CDH9-202ENST00000505020 PAFAH1B3Q15102 231 aaKnown RBP5.78□□□□□ -1.48
CDH9-202ENST00000505020 ZNF181Q2M3W8 571 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 FTMTQ8N4E7 242 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 VN1R17PQ8TDU5 208 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 C17orf77Q96MU5 243 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 MEIS3Q99687 375 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 PSMG3Q9BT73 122 aaPredicted RBP5.78□□□□□ -1.48
CDH9-202ENST00000505020 SSBP3Q9BWW4 388 aaPredicted RBP5.78□□□□□ -1.48
CDH9-202ENST00000505020 OR2H1Q9GZK4 316 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 ZNF224Q9NZL3 707 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 C11orf21Q9P2W6 132 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 TBX21Q9UL17 535 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 HIGD1AQ9Y241 93 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 CPSF1Q10570 1443 aaKnown RBP5.78□□□□□ -1.48
CDH9-202ENST00000505020 EEA1Q15075 1411 aa5.78□□□□□ -1.48
CDH9-202ENST00000505020 ABCC12Q96J65 1359 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 LOC102725191A0A1B0GVB3 256 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 A0A1B0GXF2 115 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 C8orf87E5RJ46 101 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 I3L4J1 428 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 SAP18O00422 153 aaKnown RBP5.77□□□□□ -1.49
CDH9-202ENST00000505020 OR2A4O95047 310 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 NDUFC2O95298 119 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 EPPINO95925 133 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 EIF4EP06730 217 aaKnown RBP5.77□□□□□ -1.49
CDH9-202ENST00000505020 NECTIN1Q15223 517 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 BATFQ16520 125 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 GSG1Q2KHT4 349 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 TTC32Q5I0X7 151 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 ZNF506Q5JVG8 444 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 CNIH2Q6PI25 160 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 ZNF615Q8N8J6 731 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 OR8B12Q8NGG6 310 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 OR2G3Q8NGZ4 309 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 RDH12Q96NR8 316 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 OR2A7Q96R45 310 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 SLC25A33Q9BSK2 321 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 SELENOKQ9Y6D0 94 aa5.77□□□□□ -1.49
CDH9-202ENST00000505020 BRCA1P38398 1863 aaKnown RBP5.77□□□□□ -1.49
CDH9-202ENST00000505020 TRAV8-2A0A0B4J237 113 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 TRAV38-1A0A0B4J264 116 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 LINC01553A4QN01 128 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 GAGE12JA6NER3 117 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 GAGE7O76087 117 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 ZNF682O95780 498 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 IGHMP01871 453 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 SNRPCP09234 159 aaKnown RBP5.76□□□□□ -1.49
CDH9-202ENST00000505020 GAGE12FP0CL80 117 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 GAGE12GP0CL81 117 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 GAGE12IP0CL82 117 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 EGR2P11161 476 aaPredicted RBP5.76□□□□□ -1.49
CDH9-202ENST00000505020 CACNG7P62955 275 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 CDK6Q00534 326 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 GAGE4Q13068 117 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 RHEBQ15382 184 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 TIMM50Q3ZCQ8 353 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 TMEM219Q86XT9 240 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 EXOC3-AS1Q8N2X6 119 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 CIARTQ8N365 385 aaPredicted RBP5.76□□□□□ -1.49
CDH9-202ENST00000505020 DEFB125Q8N687 156 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 BTN2A3PQ96KV6 586 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 BBC3Q96PG8 261 aaPredicted RBP5.76□□□□□ -1.49
CDH9-202ENST00000505020 METTL26Q96S19 204 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 TMEM70Q9BUB7 260 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 LRRC61Q9BV99 259 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 CHST6Q9GZX3 395 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 SCN3BQ9NY72 215 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 USP6P35125 1406 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 RALGAPA1Q6GYQ0 2036 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 TMEM2Q9UHN6 1383 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 DOCK3Q8IZD9 2030 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 NPHP4O75161 1426 aaPredicted RBP5.76□□□□□ -1.49
CDH9-202ENST00000505020 YEATS2Q9ULM3 1422 aa5.76□□□□□ -1.49
CDH9-202ENST00000505020 TRAV26-2A0A0B4J265 109 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms