RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-220	ENST00000504687	RAB18	Q9NP72	206 aa		11.14	□□□□□ -0.63
LMNA-220	ENST00000504687	LRRC30	A6NM36	301 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687		K7N7A8	449 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	HSPB6	O14558	160 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	MGST3	O14880	152 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	SIAH2	O43255	324 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	B3GALNT1	O75752	331 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	HEXA	P06865	529 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	RCC1	P18754	421 aa	Predicted RBP	11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	C2orf68	Q2NKX9	166 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	ZNF672	Q499Z4	452 aa	Predicted RBP	11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	LIN54	Q6MZP7	749 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	CLEC18B	Q6UXF7	455 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	SGPP2	Q8IWX5	399 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	ZNF843	Q8N446	348 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	CCDC71L	Q8N9Z2	235 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	OR5D13	Q8NGL4	314 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	OR2T35	Q8NGX2	323 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	LINC01560	Q8TB33	94 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	COQ2	Q96H96	371 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	KCNIP1	Q9NZI2	227 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	DNAJB11	Q9UBS4	358 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	OR14J1	Q9UGF5	321 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	TRAPPC2L	Q9UL33	140 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	PPP1R3C	Q9UQK1	317 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	KCNIP3	Q9Y2W7	256 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	OR2W1	Q9Y3N9	320 aa		11.13	□□□□□ -0.63
LMNA-220	ENST00000504687	PCNX1	Q96RV3	2341 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	PIGBOS1	A0A0B4J2F0	54 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	IGHV3-64D	A0A0J9YX35	117 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	FAM172BP	A6NC97	362 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	HMSD	A8MTL9	139 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	GOSR2	O14653	212 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	GOSR1	O95249	250 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	IFNA2	P01563	188 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	IRF2	P14316	349 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	VAMP1	P23763	118 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	DNASE1	P24855	282 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	GRN	P28799	593 aa	Known RBP	11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	CYCS	P99999	105 aa	Known RBP	11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	FGL1	Q08830	312 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	BAMBI	Q13145	260 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	ATXN7L3	Q14CW9	347 aa	Predicted RBP	11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	C1orf87	Q8N0U7	546 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	OR10J5	Q8NHC4	309 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	KIRREL1	Q96J84	757 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	SUCNR1	Q9BXA5	334 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	NAA60	Q9H7X0	242 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	SLC2A9	Q9NRM0	540 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	CISD1	Q9NZ45	108 aa	Known RBP	11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	PLCE1	Q9P212	2302 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	DYSF	O75923	2080 aa		11.12	□□□□□ -0.63
LMNA-220	ENST00000504687	SPTA1	P02549	2419 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	C3orf80	F5H4A9	247 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	GZMH	P20718	246 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	NFYA	P23511	347 aa	Predicted RBP	11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	GNRHR	P30968	328 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	CEBPD	P49716	269 aa	Predicted RBP	11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	PPOX	P50336	477 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	PIGP	P57054	158 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	HTD2	P86397	168 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	ABCA11P	Q4W5N1	156 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	ZNF788	Q6ZQV5	615 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	AKR1E2	Q96JD6	320 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	NMES1	Q9C002	83 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	TAF9B	Q9HBM6	251 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	RAB9B	Q9NP90	201 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687	KIF25	Q9UIL4	384 aa		11.11	□□□□□ -0.63
LMNA-220	ENST00000504687		B8ZZF3	427 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	LGALS8	O00214	317 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	GPR31	O00270	319 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	RGS13	O14921	159 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	BET1	O15155	118 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	IGFBP2	P18065	325 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	PI3	P19957	117 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	GNLY	P22749	145 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	NKX2-5	P52952	324 aa	Predicted RBP	11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	GMFB	P60983	142 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	SRPX	P78539	464 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	ANKRD55	Q3KP44	614 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	TMEM30B	Q3MIR4	351 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	KRBOX4	Q5JUW0	171 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	DCAF12L2	Q5VW00	463 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	LAMTOR1	Q6IAA8	161 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	C9orf62	Q8N4C0	152 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	BVES	Q8NE79	360 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	OR11H4	Q8NGC9	324 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	TOMM40L	Q969M1	308 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	GALM	Q96C23	342 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	GON7	Q9BXV9	100 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	ZNF665	Q9H7R5	613 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	SAP30L	Q9HAJ7	183 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	METRN	Q9UJH8	293 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	MAB21L2	Q9Y586	359 aa		11.1	□□□□□ -0.63
LMNA-220	ENST00000504687	TRAV38-1	A0A0B4J264	116 aa		11.09	□□□□□ -0.63
LMNA-220	ENST00000504687	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.09	□□□□□ -0.63
LMNA-220	ENST00000504687	C12orf77	C9JDV5	145 aa		11.09	□□□□□ -0.63

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