RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CEPT1Q9Y6K0 416 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 C2CD3Q4AC94 2353 aa9.74□□□□□ -0.85
PDLIM5-208ENST00000504489 IGHV1-69DA0A0B4J2H0 117 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 POM121CA8CG34 1229 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 NPIPB11E5RHQ5 1161 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 RNASEK-C17orf49H0YIS7 233 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 ORC5O43913 435 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 NOL3O60936 208 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 CLPXO76031 633 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 NAPSAO96009 420 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 IGHV1-69P01742 117 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 IGHV1-8P0DP01 117 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 EPHA1P21709 976 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 GLP1RP43220 463 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 UBE2E1P51965 193 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 DLX1P56177 255 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 MOGAT2Q3SYC2 334 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 HCP5Q6MZN7 132 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 TRAT1Q6PIZ9 186 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 C9orf139Q6ZV77 190 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 MRPL30Q8TCC3 161 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 MRGPRDQ8TDS7 321 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 ACOT12Q8WYK0 555 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 ISOC1Q96CN7 298 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 CYYR1Q96J86 154 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 RIMS4Q9H426 269 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 MBNL3Q9NUK0 354 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 CALYQ9NYX4 217 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 KCNK7Q9Y2U2 307 aa9.73□□□□□ -0.85
PDLIM5-208ENST00000504489 JMJD1CQ15652 2540 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 TRBV6-6A0A0A6YYG2 114 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 A0A0A6YYH2 397 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 TRAV39A0A0B4J263 110 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 A6NJ64 397 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 H3BMQ9 156 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 MFNGO00587 321 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 MMP23AO75900 390 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 HIST1H1DP16402 221 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 ZNF182P17025 639 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 CDK2P24941 298 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 FPR2P25090 351 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 KLRD1Q13241 179 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 SPCS2Q15005 226 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 ARL6IP1Q15041 203 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 OXLD1Q5BKU9 147 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 C6orf183Q5T699 404 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 OR52W1Q6IF63 320 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 ZNF880Q6PDB4 577 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 ZNF554Q86TJ5 538 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 RTN4RL2Q86UN3 420 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 OR10A7Q8NGE5 316 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 OR4K15Q8NH41 348 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 CCDC107Q8WV48 283 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 SLC25A38Q96DW6 304 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 MS4A7Q9GZW8 240 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 RBM38Q9H0Z9 239 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 ABCG5Q9H222 651 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 ZNF69Q9UC07 566 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 AK3Q9UIJ7 227 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 TRAPPC2LQ9UL33 140 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 SESN1Q9Y6P5 492 aa9.72□□□□□ -0.85
PDLIM5-208ENST00000504489 IGHV3OR16-10A0A075B7F0 116 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 SERPINE3A8MV23 424 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 C15orf65H3BRN8 121 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 ZNF701M0R085 212 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 GSTP1P09211 210 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 RCC1P18754 421 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 SSTR5P35346 364 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 PRB3Q04118 309 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 UBE2NLQ5JXB2 153 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 PRAMEF5Q5TYX0 476 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 ZNF782Q6ZMW2 699 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 OR11H6Q8NGC7 330 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 OR52M1Q8NGK5 317 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 OR13D1Q8NGV5 346 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 DYNC2LI1Q8TCX1 351 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 AP3S1Q92572 193 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 PHF21AQ96BD5 680 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 KIRREL1Q96J84 757 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 CMTM3Q96MX0 182 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 CMSS1Q9BQ75 279 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 TMEM133Q9H2Q1 129 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 RAB9BQ9NP90 201 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 DIABLOQ9NR28 239 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 IDI2-AS1Q9NZ38 188 aa9.71□□□□□ -0.86
PDLIM5-208ENST00000504489 A0A087X0M5 115 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 A0A1B0GX30 115 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 C12orf77C9JDV5 145 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 F2RL2O00254 374 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 NPFFO15130 113 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 CD3GP09693 182 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 GNB3P16520 340 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 OMGP23515 440 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 CD34P28906 385 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 SOX6P35712 828 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 GDNFP39905 211 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 CDNFQ49AH0 187 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 MIDNQ504T8 468 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 RUSC1-AS1Q66K80 236 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms