RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 FPR2P25090 351 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CDAP32320 146 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 RPL29P47914 159 aaKnown RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 MMP15P51511 669 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 RAG2P55895 527 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 TAS2R46P59540 309 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 RPL18Q07020 188 aaKnown RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 MFGE8Q08431 387 aaPredicted RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 IHHQ14623 411 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 VAMP3Q15836 100 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 TMEM241Q24JQ0 296 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 PHYHD1Q5SRE7 291 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 C1orf140Q5VVS0 124 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 C6orf15Q6UXA7 325 aaPredicted RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 STAC2Q6ZMT1 411 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ADGRE4PQ86SQ3 457 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ADIPOR2Q86V24 386 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 BOD1L2Q8IYS8 172 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 LGI3Q8N145 548 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF610Q8N9Z0 462 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 OR4C3Q8NH37 302 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ANKRD9Q96BM1 317 aaPredicted RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 RAB39BQ96DA2 213 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SEH1LQ96EE3 360 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SMIM10Q96HG1 83 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 BTF3L4Q96K17 158 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 GPR84Q9NQS5 396 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CMC2Q9NRP2 79 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CLCF1Q9UBD9 225 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 DAPP1Q9UN19 280 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 TNCP24821 2201 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 NSG1A0A0A6YYJ2 146 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 hCG_38984A0A1B0GV85 526 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF587BE7ETH6 402 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SOD1P00441 154 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 HLA-DOBP13765 273 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ADRA2CP18825 462 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CHRNB4P30926 498 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 KRTDAPP60985 99 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 CDK5R1Q15078 307 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 EFNB3Q15768 340 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 MLF2Q15773 248 aaPredicted RBP3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF684Q5T5D7 378 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 KIAA0895LQ68EN5 471 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 Q6ZS52 159 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SLC36A1Q7Z2H8 476 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 EID2Q8N6I1 236 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 GVQW1Q8N7I0 195 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 OR4F5Q8NH21 305 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 C16orf52Q8NHV5 167 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 Q8WTZ3 238 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 SLC25A38Q96DW6 304 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 TIMP4Q99727 224 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 C20orf144Q9BQM9 153 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 A4GALTQ9NPC4 353 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF355PQ9NSJ1 428 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 PITPNC1Q9UKF7 332 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 B3GALT5Q9Y2C3 310 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 NOTCH4Q99466 2003 aa3.21□□□□□ -1.9
PCDH11X-208ENST00000504220 IGLV3-10A0A075B6K4 115 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 TRAV39A0A0B4J263 110 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 PRSS37A4D1T9 235 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 FAM166BA8MTA8 275 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 FTCDNL1E5RQL4 147 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 CDIPTO14735 213 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 SCRG1O75711 98 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 TGFAP01135 160 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 TTRP02766 147 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 MMP7P09237 267 aaPredicted RBP3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 OR10J4P0C629 311 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 LIMS3P0CW19 117 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 LIMS4P0CW20 117 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 CD38P28907 300 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 ID4P47928 161 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 EMDP50402 254 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 P2RX1P51575 399 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 OR1D5P58170 312 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 B4GALNT1Q00973 533 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 KIAA0040Q15053 153 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 PCK2Q16822 640 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 TPTE2P1Q5T6R2 138 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 FAHD1Q6P587 224 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 KCNIP4Q6PIL6 250 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 TEX43Q6ZNM6 134 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 DNM1P46Q6ZS02 220 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 PRSS41Q7RTY9 318 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 MUC20Q8N307 709 aaPredicted RBP3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 NOXO1Q8NFA2 376 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 OR51F2Q8NH61 342 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 ASB17Q8WXJ9 295 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 BORCS7Q96B45 105 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 SFRP2Q96HF1 295 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 LOXL4Q96JB6 756 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 DCBLD2Q96PD2 775 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 LYSMD1Q96S90 227 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 SMIM7Q9BQ49 75 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 TIMM29Q9BSF4 260 aa3.2□□□□□ -1.9
PCDH11X-208ENST00000504220 PPDPFQ9H3Y8 114 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms