RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 INO80EQ8NBZ0 244 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 SLC5A7Q9GZV3 580 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 TAAR3PQ9P1P4 343 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 TUBD1Q9UJT1 453 aa17.99■□□□□ 0.47
UBE2D3-216ENST00000503742 C16orf97H3BN30 126 aa17.98■□□□□ 0.47
UBE2D3-216ENST00000503742 GPR31O00270 319 aa17.98■□□□□ 0.47
UBE2D3-216ENST00000503742 CD40P25942 277 aa17.98■□□□□ 0.47
UBE2D3-216ENST00000503742 ZNF565Q8N9K5 539 aa17.98■□□□□ 0.47
UBE2D3-216ENST00000503742 OR10J5Q8NHC4 309 aa17.98■□□□□ 0.47
UBE2D3-216ENST00000503742 DCUN1D4Q92564 292 aa17.98■□□□□ 0.47
UBE2D3-216ENST00000503742 KIRREL1Q96J84 757 aa17.98■□□□□ 0.47
UBE2D3-216ENST00000503742 TP53RKQ96S44 253 aa17.98■□□□□ 0.47
UBE2D3-216ENST00000503742 SH3BGRL2Q9UJC5 107 aa17.98■□□□□ 0.47
UBE2D3-216ENST00000503742 KANTRA0A1W2PQU2 76 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 LGI3Q8N145 548 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 SCARB1Q8WTV0 552 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 RRNAD1Q96FB5 475 aaKnown RBP17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 OR5AC2Q9NZP5 309 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 GSKIPQ9P0R6 139 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 KIF25Q9UIL4 384 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 TRAPPC2LQ9UL33 140 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 OR2W1Q9Y3N9 320 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 TRAV39A0A0B4J263 110 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 C3orf85A0A1B0GTC6 90 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 PHF1O43189 567 aaPredicted RBP17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 RRASP10301 218 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 RPS23P62266 143 aaKnown RBP17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 HMGN3Q15651 99 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 SMIM21Q3B7S5 101 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 BEX5Q5H9J7 111 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 COMMD7Q86VX2 200 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 OR10Z1Q8NGY1 313 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 LHFPL5Q8TAF8 219 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 LRRC20Q8TCA0 184 aa17.97■□□□□ 0.47
UBE2D3-216ENST00000503742 hCG_1807616A0A1W2PRN6 198 aa17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 IFNL4K9M1U5 179 aa17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 KCNAB3O43448 404 aa17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 CFHR2P36980 270 aa17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 UBA52P62987 128 aaKnown RBP17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 RBPJQ06330 500 aa17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 VHLLQ6RSH7 139 aa17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 ALKAL2Q6UX46 152 aa17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 LYZL2Q7Z4W2 148 aa17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 TBC1D26Q86UD7 250 aa17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 CCL28Q9NRJ3 127 aa17.96■□□□□ 0.47
UBE2D3-216ENST00000503742 PET100P0DJ07 73 aa17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 SLC35E4Q6ICL7 350 aa17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 LRRC29Q8WV35 223 aa17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 PCNPQ8WW12 178 aaKnown RBP17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 ST8SIA2Q92186 375 aa17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 TMEM222Q9H0R3 208 aa17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 OR1A1Q9P1Q5 309 aa17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 TMEM30CPA0ZSE6 113 aa17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 SPDEFO95238 335 aa17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 CNTNAP3BQ96NU0 1288 aa17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 CNTNAP3Q9BZ76 1288 aa17.95■□□□□ 0.46
UBE2D3-216ENST00000503742 SRRM5B3KS81 715 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 I3L521 148 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 SRPXP78539 464 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 FAM219AQ8IW50 185 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 NUP37Q8NFH4 326 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 OR1S1Q8NH92 325 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 IL1F10Q8WWZ1 152 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 MEGF10Q96KG7 1140 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 TMEM56Q96MV1 263 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 MRPL37Q9BZE1 423 aaKnown RBP17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 TAF9BQ9HBM6 251 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 FBXO9Q9UK97 447 aaPredicted RBP17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 TMEM56-RWDD3S4R434 201 aa17.94■□□□□ 0.46
UBE2D3-216ENST00000503742 HSD17B6O14756 317 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 SPRNQ5BIV9 151 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 AQP10Q96PS8 301 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 OR2V2Q96R30 315 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 DMRTA2Q96SC8 542 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 ARPC5LQ9BPX5 153 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 DNAJB11Q9UBS4 358 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 ERRFI1Q9UJM3 462 aaPredicted RBP17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 RLN2P04090 185 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 HEXAP06865 529 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 EGR1P18146 543 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 OR3A1P47881 315 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 S100A10P60903 97 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 TESK1Q15569 626 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 AANATQ16613 207 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 TMEM108Q6UXF1 575 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 CMTM1Q8IZ96 169 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 BVESQ8NE79 360 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 COQ2Q96H96 371 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 SEBOXQ9HB31 216 aaPredicted RBP17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 METRNQ9UJH8 293 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 TMED3Q9Y3Q3 217 aa17.93■□□□□ 0.46
UBE2D3-216ENST00000503742 TLN1Q9Y490 2541 aaKnown RBP17.92■□□□□ 0.46
UBE2D3-216ENST00000503742 MSGN1A6NI15 193 aa17.92■□□□□ 0.46
UBE2D3-216ENST00000503742 TFF1P04155 84 aa17.92■□□□□ 0.46
UBE2D3-216ENST00000503742 THBDP07204 575 aa17.92■□□□□ 0.46
UBE2D3-216ENST00000503742 PTAFRP25105 342 aa17.92■□□□□ 0.46
UBE2D3-216ENST00000503742 LUMP51884 338 aaPredicted RBP17.92■□□□□ 0.46
UBE2D3-216ENST00000503742 COL10A1Q03692 680 aa17.92■□□□□ 0.46
UBE2D3-216ENST00000503742 SSX8Q7RTT4 187 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms