RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 NDUFB3O43676 98 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 SLC22A5O76082 557 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 RGS11O94810 467 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 F12P00748 615 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 PPYP01298 95 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 CTSDP07339 412 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 SCTP09683 121 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF728P0DKX0 622 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 DAOP14920 347 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 RCC1P18754 421 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 ZBTB25P24278 435 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 IL2RGP31785 369 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 FCGR2CP31995 323 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 EFNA4P52798 201 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 EDDM3BP56851 147 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 RRAS2P62070 204 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 HTD2P86397 168 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 AESQ08117 197 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 TMEM155Q4W5P6 130 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 C4orf46Q504U0 113 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 TMEM128Q5BJH2 165 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 FAM201AQ5SY85 155 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 AADACL3Q5VUY0 350 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 CD276Q5ZPR3 534 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 CLEC18BQ6UXF7 455 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 NLRC3Q7RTR2 1065 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 TMED4Q7Z7H5 227 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 AKAP14Q86UN6 197 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 SPICQ8N5J4 248 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 CCDC71LQ8N9Z2 235 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 CLEC18CQ8NCF0 446 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNRF1Q8ND25 227 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 DEFB108BQ8NET1 73 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 MARCH1Q8TCQ1 289 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 CORO2AQ92828 525 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 NINJ1Q92982 152 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 RAB39BQ96DA2 213 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 CCL13Q99616 98 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 TOLLIPQ9H0E2 274 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 MED28Q9H204 178 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 OR51J1Q9H342 316 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 GHITMQ9H3K2 345 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 ING3Q9NXR8 418 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 TAS2R3Q9NYW6 316 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 SLC25A10Q9UBX3 287 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF69Q9UC07 566 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 MIOXQ9UGB7 285 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 FLVCR2Q9UPI3 526 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 CACNA1DQ01668 2161 aa6.78□□□□□ -1.32
TOPBP1-202ENST00000503338 DOPEY1Q5JWR5 2465 aa6.77□□□□□ -1.32
TOPBP1-202ENST00000503338 FAM208BQ5VWN6 2430 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 A0A0A6YYJ9 748 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 A0A1W2PPH5 198 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 A0A1W2PPR1 153 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 OR5H14A6NHG9 310 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF729A6NN14 1252 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 OVOL3O00110 214 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 TNFRSF13BO14836 293 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 ADAM20O43506 726 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 SSNA1O43805 119 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 RP2O75695 350 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 B3GALNT1O75752 331 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 TUSC2O75896 110 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 IGHV2-70P01814 119 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 HEXAP06865 529 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 OR4E1P0C645 316 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 ANXA3P12429 323 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 PLA2G2AP14555 144 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 ANXA7P20073 488 aaKnown RBP6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 GLIPR1P48060 266 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 NPY4RP50391 375 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 LUMP51884 338 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 CBX3Q13185 183 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 EDDM3AQ14507 147 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 MSMO1Q15800 293 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 ABCA11PQ4W5N1 156 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 IGSF11Q5DX21 431 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF626Q68DY1 528 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 SP5Q6BEB4 398 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 Q6ZPA2 131 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 H1FOOQ8IZA3 346 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 OR10A7Q8NGE5 316 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF431Q8TF32 576 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 ASB13Q8WXK3 278 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 ARL11Q969Q4 196 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 AKR1E2Q96JD6 320 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 PLEKHF2Q9H8W4 249 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 BARX1Q9HBU1 254 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 JPT1Q9UK76 154 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 VSIG4Q9Y279 399 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 KCNIP3Q9Y2W7 256 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 UBE2J1Q9Y385 318 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 OR2W1Q9Y3N9 320 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 LINC00312Q9Y6C7 94 aa6.77□□□□□ -1.33
TOPBP1-202ENST00000503338 TRBV23-1A0A0A0MS06 115 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 A0A0B4J293 547 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 A0A0B4J2A0 478 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 C12orf77C9JDV5 145 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 GPR31O00270 319 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 ITGB1BP1O14713 200 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms