RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 SLIRPQ9GZT3 109 aaKnown RBP3.04□□□□□ -1.92
SUB1-202ENST00000502453 R3HDMLQ9H3Y0 253 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 ZDHHC11Q9H8X9 412 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 CACYBPQ9HB71 228 aaKnown RBP3.04□□□□□ -1.92
SUB1-202ENST00000502453 RSL24D1Q9UHA3 163 aaKnown RBP3.04□□□□□ -1.92
SUB1-202ENST00000502453 U3KQ87 197 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 MTCL1Q9Y4B5 1905 aaKnown RBP3.04□□□□□ -1.92
SUB1-202ENST00000502453 RGPD3A6NKT7 1758 aaPredicted RBP3.04□□□□□ -1.92
SUB1-202ENST00000502453 RGPD4Q7Z3J3 1758 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 TNS1Q9HBL0 1735 aaKnown RBP3.04□□□□□ -1.92
SUB1-202ENST00000502453 ASXL1Q8IXJ9 1541 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 TNRC18O15417 2968 aaPredicted RBP3.04□□□□□ -1.92
SUB1-202ENST00000502453 ADGRL2O95490 1459 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 A0A0J9YY10 115 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 LOC100130705A0A1B0GUX0 176 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 A0A1B0GX78 115 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 MAP1LC3B2A6NCE7 125 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 SLC35G6P0C7Q6 338 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 LIFP15018 202 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 TSPOP30536 169 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 CSRP3P50461 194 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 MTPNP58546 118 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 DEFA3P59666 94 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 ERVFC1-1P60608 527 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 TMEM30BQ3MIR4 351 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 VAX1Q5SQQ9 334 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 RSBN1Q5VWQ0 802 aaPredicted RBP3.04□□□□□ -1.92
SUB1-202ENST00000502453 STEAP4Q687X5 459 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 Q6YL49 198 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 ZNRF2Q8NHG8 242 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 REEP6Q96HR9 211 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 LINC00477Q96M19 166 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 PSMB7Q99436 277 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 MAP1LC3BQ9GZQ8 125 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 LRP6O75581 1613 aa3.04□□□□□ -1.92
SUB1-202ENST00000502453 EHBP1L1Q8N3D4 1523 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 J3QT63 122 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 GALR3O60755 368 aaPredicted RBP3.03□□□□□ -1.92
SUB1-202ENST00000502453 ARL6IP5O75915 188 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 PIAS1O75925 651 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 MOSP00540 346 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 CD48P09326 243 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 TDGF1P13385 188 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 CD34P28906 385 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 RFX2P48378 723 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 GZMMP51124 257 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 HBA1P69905 142 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 ICAM4Q14773 271 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 SNRNP35Q16560 246 aaKnown RBP3.03□□□□□ -1.92
SUB1-202ENST00000502453 CLLU1Q5K131 121 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 TNFAIP8L2Q6P589 184 aaPredicted RBP3.03□□□□□ -1.92
SUB1-202ENST00000502453 RAB42Q8N4Z0 105 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 ZNF485Q8NCK3 441 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 OR10G4Q8NGN3 311 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 OR5K1Q8NHB7 308 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 SKA2Q8WVK7 121 aaPredicted RBP3.03□□□□□ -1.92
SUB1-202ENST00000502453 VSIRQ9H7M9 311 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 MED29Q9NX70 200 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 CALYQ9NYX4 217 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 HSPB8Q9UJY1 196 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 KIF1AQ12756 1690 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 ARHGEF17Q96PE2 2063 aaPredicted RBP3.03□□□□□ -1.92
SUB1-202ENST00000502453 AHDC1Q5TGY3 1603 aaPredicted RBP3.03□□□□□ -1.92
SUB1-202ENST00000502453 NEXMIFQ5QGS0 1516 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 A0A1B0GWB2 263 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 TRAPPC13A5PLN9 417 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 C15orf61A6NNL5 157 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 HMGB3O15347 200 aaKnown RBP3.03□□□□□ -1.92
SUB1-202ENST00000502453 UBBP0CG47 229 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 PSG1P11464 419 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 GLRXP35754 106 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 LTC4SQ16873 150 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 OTPQ5XKR4 325 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 HIST2H3AQ71DI3 136 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 HSD17B13Q7Z5P4 300 aaPredicted RBP3.03□□□□□ -1.92
SUB1-202ENST00000502453 RBMXL3Q8N7X1 1067 aaKnown RBP3.03□□□□□ -1.92
SUB1-202ENST00000502453 ZNF439Q8NDP4 499 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 OR52L1Q8NGH7 329 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 OR2T4Q8NH00 348 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 ROPN1LQ96C74 230 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 ST6GAL2Q96JF0 529 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 TEX37Q96LM6 180 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 SULT4A1Q9BR01 284 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 LINC00470Q9BZP3 86 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 RREB1Q92766 1687 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 PATE3B3GLJ2 98 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 IGKV1D-16P01601 117 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 TRAPPC2P0DI81 140 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 TRAPPC2BP0DI82 140 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 PRKACGP22612 351 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 KLK7P49862 253 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 HIST3H3Q16695 136 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 CLEC12BQ2HXU8 276 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 MUC21Q5SSG8 566 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 LAMTOR1Q6IAA8 161 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 OPN5Q6U736 354 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 RFLNBQ8N5W9 214 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 SECTM1Q8WVN6 248 aa3.03□□□□□ -1.92
SUB1-202ENST00000502453 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.03□□□□□ -1.92
SUB1-202ENST00000502453 SLC35G5Q96KT7 338 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms