RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 RETNQ9HD89 108 aa11.99□□□□□ -0.49
HDAC6-236ENST00000498808 GNGT2O14610 69 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 APOL3O95236 402 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 IGLV1-51P01701 117 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 LGALS1P09382 135 aaKnown RBP11.98□□□□□ -0.49
HDAC6-236ENST00000498808 ANXA8P13928 327 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 ARSBP15848 533 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 ZNF20P17024 532 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 EFNB1P98172 346 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 ADGRG5Q8IZF4 528 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 OR13C9Q8NGT0 318 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 UBALD1Q8TB05 177 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 CNIH3Q8TBE1 160 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 NR1H4Q96RI1 486 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-236ENST00000498808 MBOAT4Q96T53 435 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 PARP11Q9NR21 331 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 NDE1Q9NXR1 346 aa11.98□□□□□ -0.49
HDAC6-236ENST00000498808 KMT2AQ03164 3969 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 IGHV7-81A0A0B4J1V7 117 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 TRAV41A0A0B4J266 112 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 C15orf65H3BRN8 121 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 SLC31A2O15432 143 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 SOX15O60248 233 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 SULT1C4O75897 302 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 MT-ND2P03891 347 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 OCM2P0CE71 109 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-236ENST00000498808 TRIM25Q14258 630 aaKnown RBP11.97□□□□□ -0.49
HDAC6-236ENST00000498808 PTGES3Q15185 160 aaKnown RBP11.97□□□□□ -0.49
HDAC6-236ENST00000498808 MMDQ15546 238 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 TCEANCQ8N8B7 351 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 C8orf31Q8N9H6 132 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 MINDY2Q8NBR6 621 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 OR10AC1Q8NH08 325 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 CASTOR1Q8WTX7 329 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 H2AFY2Q9P0M6 372 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-236ENST00000498808 MYRFQ9Y2G1 1151 aa11.97□□□□□ -0.49
HDAC6-236ENST00000498808 MRPS28Q9Y2Q9 187 aaKnown RBP11.97□□□□□ -0.49
HDAC6-236ENST00000498808 IGHV3-43A0A0B4J1X8 118 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 IGHV3-43DP0DP04 118 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 IL3RAP26951 378 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 CNTFRP26992 372 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 BLVRBP30043 206 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-236ENST00000498808 C19orf54Q5BKX5 351 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 TMEM244Q5VVB8 128 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 OR51A4Q8NGJ6 313 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 OR52M1Q8NGK5 317 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 TMEM163Q8TC26 289 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 UTP4Q969X6 686 aaKnown RBP11.96□□□□□ -0.49
HDAC6-236ENST00000498808 FAM110AQ9BQ89 295 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 FAM118AQ9NWS6 357 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 GFOD1Q9NXC2 390 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 ZNF581Q9P0T4 197 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 STUB1Q9UNE7 303 aa11.96□□□□□ -0.49
HDAC6-236ENST00000498808 C12orf77C9JDV5 145 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 SDCBPO00560 298 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-236ENST00000498808 TXNL1O43396 289 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 HLA-DRB1P01911 266 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 OR2T7P0C7T2 308 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 TMEM225BP0DP42 221 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 DBTP11182 482 aaKnown RBP11.95□□□□□ -0.5
HDAC6-236ENST00000498808 KCNJ3P48549 501 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 ZNF137PP52743 207 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 ZSCAN26Q16670 478 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 TP53I3Q53FA7 332 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 ELP2Q6IA86 826 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 OR2G2Q8NGZ5 317 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 ARL11Q969Q4 196 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 RSRP1Q9BUV0 290 aa11.95□□□□□ -0.5
HDAC6-236ENST00000498808 DNAH10Q8IVF4 4471 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 ISG15P05161 165 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 GZMHP20718 246 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 MNAT1P51948 309 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 NANOS3P60323 173 aaKnown RBP11.94□□□□□ -0.5
HDAC6-236ENST00000498808 NDPQ00604 133 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 LSAMPQ13449 338 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 IL13RA2Q14627 380 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 PIGYQ3MUY2 71 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 SLC25A48Q6ZT89 311 aaKnown RBP11.94□□□□□ -0.5
HDAC6-236ENST00000498808 ANKRD13BQ86YJ7 626 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 GID4Q8IVV7 300 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 ZNF439Q8NDP4 499 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 OR10H4Q8NGA5 316 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 CANT1Q8WVQ1 401 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 DDB2Q92466 427 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 RITA1Q96K30 269 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 IL4I1Q96RQ9 567 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 PRRG3Q9BZD7 231 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 HIPK2Q9H2X6 1198 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 FRRS1LQ9P0K9 344 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 GNG8Q9UK08 70 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 FBXO7Q9Y3I1 522 aa11.94□□□□□ -0.5
HDAC6-236ENST00000498808 A0A1W2PN81 502 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 SNX3O60493 162 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 IGHV3-11P01762 117 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 HSPB1P04792 205 aaKnown RBP11.93□□□□□ -0.5
HDAC6-236ENST00000498808 EPHA2P29317 976 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 CHRNA7P36544 502 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 ZNF134P52741 427 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 ZNF85Q03923 595 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms