RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 TMEM17Q86X19 198 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 FBXL14Q8N1E6 418 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 CIARTQ8N365 385 aaPredicted RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 BPIFB2Q8N4F0 458 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 Q8N9P0 234 aaPredicted RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 OR4K15Q8NH41 348 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 OR56B4Q8NH76 319 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 HPSE2Q8WWQ2 592 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 RNASE6Q93091 150 aaKnown RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 SLC25A21Q9BQT8 299 aaPredicted RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 CHST6Q9GZX3 395 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 OR51I2Q9H344 312 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 RANBP3Q9H6Z4 567 aaPredicted RBP4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 SPACA1Q9HBV2 294 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 KCNJ16Q9NPI9 418 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 GLS2Q9UI32 602 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 EDARQ9UNE0 448 aa4.47□□□□□ -1.69
HMGXB4-208ENST00000498325 TRAV6A0A075B6T7 132 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 IGKV1-12A0A0C4DH73 117 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 LOC105371267A0A1B0GV96 52 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 MCRIP1C9JLW8 97 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 GEMIN2O14893 280 aaKnown RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 SYNGR1O43759 233 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 PDCD6O75340 191 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 OR7C1O76099 320 aaPredicted RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 NDUFB6O95139 128 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 CLDN14O95500 239 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 IGKV1D-12P01611 117 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 CD74P04233 296 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 BCL3P20749 454 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 C4BPBP20851 252 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 TNFSF4P23510 183 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 DTYMKP23919 212 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 CHATP28329 748 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 BTCP35070 178 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 NPBWR2P48146 333 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF81P51508 661 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 TAS2R46P59540 309 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 RRAS2P62070 204 aaPredicted RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 NKX6-1P78426 367 aaPredicted RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 IL13RA2Q14627 380 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 GRK1Q15835 563 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 TATDN3Q17R31 274 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 ALKBH6Q3KRA9 238 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 SMUG1Q53HV7 270 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 TMEM255AQ5JRV8 349 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 PLAC9Q5JTB6 97 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 SLC22A25Q6T423 547 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 C6orf201Q7Z4U5 140 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 HOGA1Q86XE5 327 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 FAM58AQ8N1B3 248 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 SCCPDHQ8NBX0 429 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 NUP37Q8NFH4 326 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 OR10AD1Q8NGE0 317 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 OR4C16Q8NGL9 310 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 CA5BP1Q8WTZ4 195 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 NUDCD2Q8WVJ2 157 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 ST8SIA4Q92187 359 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 EMG1Q92979 244 aaKnown RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 SLAMF9Q96A28 289 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 SCGB3A2Q96PL1 93 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 PRRT1Q99946 306 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 CMSS1Q9BQ75 279 aaKnown RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 FAAP24Q9BTP7 215 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 C20orf85Q9H1P6 137 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 RIMS4Q9H426 269 aaPredicted RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 ESRP2Q9H6T0 727 aaKnown RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF442Q9H7R0 627 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 GPN1Q9HCN4 374 aaPredicted RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 RANGRFQ9HD47 186 aaPredicted RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 NUDT15Q9NV35 164 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 MTCH1Q9NZJ7 389 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 ELF5Q9UKW6 265 aaPredicted RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 KCNK7Q9Y2U2 307 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 ALG5Q9Y673 324 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 AUP1Q9Y679 476 aa4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 INTS1Q8N201 2190 aaKnown RBP4.46□□□□□ -1.7
HMGXB4-208ENST00000498325 IGLV3-9A0A075B6K5 115 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 A0A1B0GWJ7 208 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 DPRXA6NFQ7 191 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ZSCAN5BA6NJL1 495 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 A6NLC8 198 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ATP6V1G2-DDX39BF2Z307 99 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 H0YL77 283 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 H7C1Q1 480 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 M0QYG6 137 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ABCD4O14678 606 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 CDIPTO14735 213 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 SH2D1BO14796 132 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 DEGS1O15121 323 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ARPC1BO15143 372 aaKnown RBP4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 MLNRO43193 412 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 SSX5O60225 188 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 PEX14O75381 377 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 NXPH2O95156 264 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 IFNA7P01567 189 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 IL5P05113 134 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 FCER2P06734 321 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 PGA5P0DJD9 388 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 MDH2P40926 338 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms