RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 FGL1Q08830 312 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 CDSNQ15517 529 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 CARTPTQ16568 116 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 MST1LQ2TV78 715 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 CR1LQ2VPA4 569 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 C11orf91Q3C1V1 193 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 AADACL3Q5VUY0 350 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 ZNF788Q6ZQV5 615 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 KCTD9Q7L273 389 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 DTX2Q86UW9 622 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 TCTE3Q8IZS6 198 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 CD177Q8N6Q3 437 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 UXS1Q8NBZ7 420 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 ZBTB34Q8NCN2 500 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 MITD1Q8WV92 249 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 IL1F10Q8WWZ1 152 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 DYRK2Q92630 601 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 AKR1E2Q96JD6 320 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 CABLES2Q9BTV7 478 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 BEX2Q9BXY8 128 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 GAL3ST2Q9H3Q3 398 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 BEX1Q9HBH7 125 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 TAF9BQ9HBM6 251 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 VSIG4Q9Y279 399 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 OR2W1Q9Y3N9 320 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 ITPR1Q14643 2758 aa7.08□□□□□ -1.28
SF3A1-210ENST00000498259 A0A0B4J293 547 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 hCG_1809904A0A1W2PP81 198 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 A0A1W2PPE2 198 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 A0A1W2PR64 198 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 A0A1W2PRV1 198 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 C9orf170A2RU37 121 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 OR5H14A6NHG9 310 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.07□□□□□ -1.28
SF3A1-210ENST00000498259 GPR31O00270 319 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 ZNF737O75373 536 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 PLAUP00749 431 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 SCTP09683 121 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 RCC1P18754 421 aaPredicted RBP7.07□□□□□ -1.28
SF3A1-210ENST00000498259 LOXP28300 417 aaPredicted RBP7.07□□□□□ -1.28
SF3A1-210ENST00000498259 CD80P33681 288 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 EIF2B2P49770 351 aaKnown RBP7.07□□□□□ -1.28
SF3A1-210ENST00000498259 EDDM3BP56851 147 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 PIGPP57054 158 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 FXYD4P59646 89 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 CD83Q01151 205 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 DHODHQ02127 395 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 DHRS2Q13268 280 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 EDDM3AQ14507 147 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 HMGN3Q15651 99 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 MSMO1Q15800 293 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 ZNF660Q6AZW8 331 aaPredicted RBP7.07□□□□□ -1.28
SF3A1-210ENST00000498259 C17orf107Q6ZR85 190 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 PRR18Q8N4B5 295 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 OR2AK2Q8NG84 335 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 OR10A7Q8NGE5 316 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 NEUROG1Q92886 237 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 TOMM40LQ969M1 308 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 ARL11Q969Q4 196 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 C14orf79Q96F83 325 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 HYLS1Q96M11 299 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 RSRP1Q9BUV0 290 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 SUCNR1Q9BXA5 334 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 ZNF436Q9C0F3 470 aaPredicted RBP7.07□□□□□ -1.28
SF3A1-210ENST00000498259 SLC5A7Q9GZV3 580 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 SHARPINQ9H0F6 387 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 C5orf66Q9H5L9 145 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 OR2S2Q9NQN1 319 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 ZFP57Q9NU63 452 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 TAS2R3Q9NYW6 316 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 COMMD9Q9P000 198 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 ZNF581Q9P0T4 197 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 MGAT4CQ9UBM8 478 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 KAAG1Q9UBP8 84 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 KIF25Q9UIL4 384 aa7.07□□□□□ -1.28
SF3A1-210ENST00000498259 UBE2J1Q9Y385 318 aaPredicted RBP7.07□□□□□ -1.28
SF3A1-210ENST00000498259 IGHV3OR15-7A0A075B7D8 119 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 IGKV1D-8A0A087WSZ0 117 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 TRBV23-1A0A0A0MS06 115 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 ZNF729A6NN14 1252 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-210ENST00000498259 SIAH2O43255 324 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 TUSC2O75896 110 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 ATG12O94817 140 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 SFT2D2O95562 160 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 GYPAP02724 150 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 HEXAP06865 529 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 GIPP09681 153 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-210ENST00000498259 NDUFB7P17568 137 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 HLA-GP17693 338 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 EGR1P18146 543 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 AADACP22760 399 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 NFYAP23511 347 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-210ENST00000498259 CEACAM6P40199 344 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 CEBPDP49716 269 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-210ENST00000498259 RAB7AP51149 207 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 RND3P61587 244 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 TLE4Q04727 773 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 PPP1R1AQ13522 171 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 IGSF11Q5DX21 431 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 RTN4RL2Q86UN3 420 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms