RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 NMES1Q9C002 83 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 IL36GQ9NZH8 169 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 SPRR3Q9UBC9 169 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 OR14J1Q9UGF5 321 aa9.96□□□□□ -0.81
SNRNP200-208ENST00000497539 TRBV6-7A0A0A0MS04 114 aa9.96□□□□□ -0.82
SNRNP200-208ENST00000497539 RAD51DO75771 328 aa9.96□□□□□ -0.82
SNRNP200-208ENST00000497539 CEBPGP53567 150 aa9.96□□□□□ -0.82
SNRNP200-208ENST00000497539 PTTG1IPP53801 180 aa9.96□□□□□ -0.82
SNRNP200-208ENST00000497539 SELENOTP62341 195 aa9.96□□□□□ -0.82
SNRNP200-208ENST00000497539 SUPT4H1P63272 117 aaKnown RBP9.96□□□□□ -0.82
SNRNP200-208ENST00000497539 RNFT1Q5M7Z0 435 aa9.96□□□□□ -0.82
SNRNP200-208ENST00000497539 RTL6Q6ICC9 239 aa9.96□□□□□ -0.82
SNRNP200-208ENST00000497539 FNDC9Q8TBE3 224 aa9.96□□□□□ -0.82
SNRNP200-208ENST00000497539 MED19A0JLT2 244 aaPredicted RBP9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 CBY3A6NI87 242 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 KNG1P01042 644 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 OR8U9P0C7N5 309 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 ARR3P36575 388 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 OR3A1P47881 315 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 NAAAQ02083 359 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 SRYQ05066 204 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 IL34Q6ZMJ4 242 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 LHFPL2Q6ZUX7 228 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 OR8U1Q8NH10 309 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 PIGTQ969N2 578 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 TAF9BQ9HBM6 251 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 WDFY4Q6ZS81 3184 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 NKX2-8O15522 239 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 EPHA1P21709 976 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 TMEM33P57088 247 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 ATP6V1FQ16864 119 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 NCR3LG1Q68D85 454 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 VWA1Q6PCB0 445 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 PRSS54Q6PEW0 395 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 TMEM108Q6UXF1 575 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 SLC5A7Q9GZV3 580 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 ZNF430Q9H8G1 570 aaPredicted RBP9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 GPR132Q9UNW8 380 aa9.95□□□□□ -0.82
SNRNP200-208ENST00000497539 ELOA3CA0A087WX78 387 aaPredicted RBP9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 A6NLC8 198 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 ZNF891A8MT65 544 aaPredicted RBP9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 TGOLN2O43493 480 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 SFT2D2O95562 160 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 FAM3AP98173 230 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 CYCSP99999 105 aaKnown RBP9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 GUSBP1Q15486 140 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 VAX1Q5SQQ9 334 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 VASH2Q86V25 355 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 DIRC2Q96SL1 478 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 RTBDNQ9BSG5 229 aaPredicted RBP9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 ZFP30Q9Y2G7 519 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 A0A1B0GV50 99 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 CEACAM18A8MTB9 384 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 CSTBP04080 98 aaKnown RBP9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 LCATP04180 440 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 OR3A2P47893 321 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 FHITP49789 147 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 TMEM50BP56557 158 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 GMPPAQ96IJ6 420 aaPredicted RBP9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 ARHGAP5-AS1Q96IT6 56 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 KIRREL1Q96J84 757 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 GPER1Q99527 375 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 PRRG4Q9BZD6 226 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 CALHM2Q9HA72 323 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 DNAJC4Q9NNZ3 241 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 CLCF1Q9UBD9 225 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 OTOGLQ3ZCN5 2332 aa9.94□□□□□ -0.82
SNRNP200-208ENST00000497539 TRAV17A0A0B4J275 112 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 hCG_1809904A0A1W2PP81 198 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 A0A1W2PR64 198 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 A0A1W2PRV1 198 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 SERPINE3A8MV23 424 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 AQP7O14520 342 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 FCGR3AP08637 254 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 WT1P19544 449 aaPredicted RBP9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 IL2RGP31785 369 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 NOVA1P51513 510 aaKnown RBP9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 SELENOVP59797 346 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 ARFRP1Q13795 201 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 JOSD1Q15040 202 aaPredicted RBP9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 Q6ZRG5 221 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 OR10AD1Q8NGE0 317 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 OR13G1Q8NGZ3 307 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 CD300LFQ8TDQ1 290 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 LPAR2Q9HBW0 351 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 ARHGAP21Q5T5U3 1957 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 TNRC6AQ8NDV7 1962 aaKnown RBP9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 ZNF816-ZNF321PA0A0X1KG74 233 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 A0A1W2PPH5 198 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 SLC22A20A6NK97 555 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 A6NNC1 897 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 PHOX2AO14813 284 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 IL18BPO95998 194 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 ARF6P62330 175 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 SSX7Q7RTT5 188 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 NUFIP2Q7Z417 695 aaKnown RBP9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 FDCSPQ8NFU4 85 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 Q96M66 194 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 ZNF48Q96MX3 618 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms