RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 BORCS7-ASMTA0A0B4J1R7 106 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 SH2D1BO14796 132 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 MLNRO43193 412 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 TNFSF13O75888 250 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 GRPP07492 148 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 CECR9P0C854 216 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 TUBG1P23258 451 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 BTN1A1Q13410 526 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 RTP5Q14D33 572 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 PXDC1Q5TGL8 231 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 PRSS33Q8NF86 280 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 IL1F10Q8WWZ1 152 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 ABHD14BQ96IU4 210 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 GPHA2Q96T91 129 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 TUBG2Q9NRH3 451 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 DKK4Q9UBT3 224 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 TINAGQ9UJW2 476 aa11.05□□□□□ -0.64
GARNL3-220ENST00000496711 CLEC18AA5D8T8 446 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 MBD3L4A6NDZ8 208 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 MBD3L3A6NE82 208 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 MBD3L5A6NJ08 208 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 ADAM20O43506 726 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 TNFSF12O43508 249 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 FBXO24O75426 580 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 PGLYRP1O75594 196 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 IGLV1-44P01699 117 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 ACAA1P09110 424 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 NKX2-1P43699 371 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 PJVKQ0ZLH3 352 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 NMSQ5H8A3 153 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 IGFL3Q6UXB1 125 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 CLEC18CQ8NCF0 446 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 OR10V1Q8NGI7 309 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 MBD3L2Q8NHZ7 208 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 LRRC46Q96FV0 321 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 BSCL2Q96G97 398 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 BCL2L14Q9BZR8 327 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 OPN3Q9H1Y3 402 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 ARV1Q9H2C2 271 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 C11orf1Q9H5F2 150 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 HES4Q9HCC6 221 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 TAAR3PQ9P1P4 343 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 OR1A1Q9P1Q5 309 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 TRAPPC2LQ9UL33 140 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 CHD3Q12873 2000 aaKnown RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 PIGBOS1A0A0B4J2F0 54 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 IGHV3-64DA0A0J9YX35 117 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 TMEM218A2RU14 115 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 SIGLEC5O15389 551 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 TIMM8AO60220 97 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 HAND1O96004 215 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 CGAP01215 116 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 WNT2P09544 360 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 PVALBP20472 110 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 KITLGP21583 273 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 VDAC1P21796 283 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 F2RP25116 425 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 LPAR6P43657 344 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 BLOC1S1P78537 153 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 DEFA5Q01523 94 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 P2RY6Q15077 328 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 CLEC9AQ6UXN8 241 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 BHLHA15Q7RTS1 189 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 ZNF610Q8N9Z0 462 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 STARD4Q96DR4 205 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 CXXC4Q9H2H0 198 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 HRH4Q9H3N8 390 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 ZNF71Q9NQZ8 489 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 PARP11Q9NR21 331 aa11.04□□□□□ -0.64
GARNL3-220ENST00000496711 ERRFI1Q9UJM3 462 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-220ENST00000496711 AKR1C2P52895 323 aa11.03□□□□□ -0.64
GARNL3-220ENST00000496711 AKR1C1Q04828 323 aa11.03□□□□□ -0.64
GARNL3-220ENST00000496711 HMGN3Q15651 99 aa11.03□□□□□ -0.64
GARNL3-220ENST00000496711 OR2C3Q8N628 320 aa11.03□□□□□ -0.64
GARNL3-220ENST00000496711 MBNL3Q9NUK0 354 aaKnown RBP11.03□□□□□ -0.64
GARNL3-220ENST00000496711 WIPI2Q9Y4P8 454 aa11.03□□□□□ -0.64
GARNL3-220ENST00000496711 TRAV39A0A0B4J263 110 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 IGHV2OR16-5A0A0B4J2B6 119 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 IGHV1-18A0A0C4DH31 117 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 OR5H1A6NKK0 313 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.02□□□□□ -0.64
GARNL3-220ENST00000496711 ABCD4O14678 606 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 EWSR1Q01844 656 aaKnown RBP eCLIP11.02□□□□□ -0.64
GARNL3-220ENST00000496711 SWI5Q1ZZU3 235 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 ATRAIDQ6UW56 229 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 Q6ZRG5 221 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 BEND4Q6ZU67 534 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 SEM1Q6ZVN7 128 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 PRR18Q8N4B5 295 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 GINS3Q9BRX5 216 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 TLNRD1Q9H1K6 362 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 WFDC1Q9HC57 220 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 OR14J1Q9UGF5 321 aa11.02□□□□□ -0.64
GARNL3-220ENST00000496711 HSPA12AO43301 675 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 SSSCA1O60232 199 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 ATG12O94817 140 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 SEC11BP0C7V7 166 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 GCH1P30793 250 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 CAV2P51636 162 aa11.02□□□□□ -0.65
GARNL3-220ENST00000496711 F2RL1P55085 397 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms