RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 GZMHP20718 246 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 REG1BP48304 166 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 RBM11P57052 281 aaKnown RBP17.39■□□□□ 0.37
HDDC3-203ENST00000494993 DCTN2Q13561 401 aaKnown RBP17.39■□□□□ 0.37
HDDC3-203ENST00000494993 TGIF2LXQ8IUE1 241 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 ZNF695Q8IW36 515 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 IZUMO1Q8IYV9 350 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 GPR148Q8TDV2 347 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 EAF1Q96JC9 268 aaPredicted RBP17.39■□□□□ 0.37
HDDC3-203ENST00000494993 METTL9Q9H1A3 318 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 ING4Q9UNL4 249 aa17.39■□□□□ 0.37
HDDC3-203ENST00000494993 RPL36Q9Y3U8 105 aaKnown RBP17.39■□□□□ 0.37
HDDC3-203ENST00000494993 IGHV3-72A0A0B4J1Y9 119 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 TMEM30CPA0ZSE6 113 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 H0YHG0 523 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 LIMS3P0CW19 117 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 LIMS4P0CW20 117 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 KLHL22Q53GT1 634 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 UNQ9370/PRO34162Q6UXP9 181 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 LINC00311Q8N616 119 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 Q8N6K4 173 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 OR52M1Q8NGK5 317 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 OR52N1Q8NH53 320 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 TMEM106AQ96A25 262 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 DUX3Q96PT4 197 aa17.38■□□□□ 0.37
HDDC3-203ENST00000494993 LIN7CQ9NUP9 197 aaKnown RBP17.38■□□□□ 0.37
HDDC3-203ENST00000494993 NCBP2LA6PVI3 153 aaKnown RBP17.37■□□□□ 0.37
HDDC3-203ENST00000494993 C15orf65H3BRN8 121 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 AP4M1O00189 453 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 GEMIN2O14893 280 aaKnown RBP17.37■□□□□ 0.37
HDDC3-203ENST00000494993 CSTBP04080 98 aaKnown RBP17.37■□□□□ 0.37
HDDC3-203ENST00000494993 ZNF93P35789 620 aaPredicted RBP17.37■□□□□ 0.37
HDDC3-203ENST00000494993 GPR12P47775 334 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 DDI2Q5TDH0 399 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 XAF1Q6GPH4 301 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 RPL22L1Q6P5R6 122 aaKnown RBP17.37■□□□□ 0.37
HDDC3-203ENST00000494993 TEX38Q6PEX7 206 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 LINC00596Q86U02 117 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 Q8N9W7 124 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 OR2T10Q8NGZ9 312 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 ARL11Q969Q4 196 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 RAX2Q96IS3 184 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 C9orf16Q9BUW7 83 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 ABCG5Q9H222 651 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 TMEM138Q9NPI0 162 aa17.37■□□□□ 0.37
HDDC3-203ENST00000494993 ZMAT5Q9UDW3 170 aaKnown RBP17.37■□□□□ 0.37
HDDC3-203ENST00000494993 SDCBPO00560 298 aaPredicted RBP17.36■□□□□ 0.37
HDDC3-203ENST00000494993 SERPINA2P20848 420 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 PPP3R1P63098 170 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 DGCR2P98153 550 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 MPV17LQ2QL34 196 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 CCDC58Q4VC31 144 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 C8orf31Q8N9H6 132 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 UBALD1Q8TB05 177 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 APH1BQ8WW43 257 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 WWC2-AS2Q96NR7 200 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 S100A13Q99584 98 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 FGF20Q9NP95 211 aaPredicted RBP17.36■□□□□ 0.37
HDDC3-203ENST00000494993 GFOD1Q9NXC2 390 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 RYR3Q15413 4870 aa17.36■□□□□ 0.37
HDDC3-203ENST00000494993 LOC100130705A0A1B0GUX0 176 aa17.35■□□□□ 0.37
HDDC3-203ENST00000494993 CCL24O00175 119 aa17.35■□□□□ 0.37
HDDC3-203ENST00000494993 RPLP1P05386 114 aaKnown RBP17.35■□□□□ 0.37
HDDC3-203ENST00000494993 IL3RAP26951 378 aa17.35■□□□□ 0.37
HDDC3-203ENST00000494993 PNLIPRP3Q17RR3 467 aa17.35■□□□□ 0.37
HDDC3-203ENST00000494993 ATAD3CQ5T2N8 411 aa17.35■□□□□ 0.37
HDDC3-203ENST00000494993 FAM53AQ6NSI3 398 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-203ENST00000494993 TMEM104Q8NE00 496 aa17.35■□□□□ 0.37
HDDC3-203ENST00000494993 CCDC107Q8WV48 283 aa17.35■□□□□ 0.37
HDDC3-203ENST00000494993 RTN4IP1Q8WWV3 396 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-203ENST00000494993 ST6GALNAC6Q969X2 333 aa17.35■□□□□ 0.37
HDDC3-203ENST00000494993 SLC29A1Q99808 456 aa17.35■□□□□ 0.37
HDDC3-203ENST00000494993 GON7Q9BXV9 100 aa17.35■□□□□ 0.37
HDDC3-203ENST00000494993 PAK1IP1Q9NWT1 392 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-203ENST00000494993 IGHV3-43A0A0B4J1X8 118 aa17.34■□□□□ 0.37
HDDC3-203ENST00000494993 ORC5O43913 435 aa17.34■□□□□ 0.37
HDDC3-203ENST00000494993 IGHV3-43DP0DP04 118 aa17.34■□□□□ 0.37
HDDC3-203ENST00000494993 CD1BP29016 333 aa17.34■□□□□ 0.37
HDDC3-203ENST00000494993 BDKRB2P30411 391 aa17.34■□□□□ 0.37
HDDC3-203ENST00000494993 GP2P55259 537 aaKnown RBP17.34■□□□□ 0.37
HDDC3-203ENST00000494993 RAB25P57735 213 aa17.34■□□□□ 0.37
HDDC3-203ENST00000494993 TFAP2CQ92754 450 aa17.34■□□□□ 0.37
HDDC3-203ENST00000494993 DCLRE1BQ9H816 532 aa17.34■□□□□ 0.37
HDDC3-203ENST00000494993 A0A1W2PP11 408 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 ZNF780AO75290 641 aaPredicted RBP17.33■□□□□ 0.36
HDDC3-203ENST00000494993 MOSP00540 346 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 VSIG8P0DPA2 414 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 ETV1P50549 477 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 GPR50Q13585 617 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 Q3ZCU0 254 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 CXorf66Q5JRM2 361 aaPredicted RBP17.33■□□□□ 0.36
HDDC3-203ENST00000494993 OR2G6Q5TZ20 316 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 ZNF497Q6ZNH5 498 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 OR8U1Q8NH10 309 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 NEK7Q8TDX7 302 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 ORAI1Q96D31 301 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 PLSCR3Q9NRY6 295 aa17.33■□□□□ 0.36
HDDC3-203ENST00000494993 SIRT4Q9Y6E7 314 aaPredicted RBP17.33■□□□□ 0.36
HDDC3-203ENST00000494993 AIPO00170 330 aa17.32■□□□□ 0.36
HDDC3-203ENST00000494993 RAMP3O60896 148 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms