RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	HMGN3	Q15651	99 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	CHRFAM7A	Q494W8	412 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	STEAP3	Q658P3	488 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	TOMM5	Q8N4H5	51 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	KIR3DL3	Q8N743	410 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	TMEM229B	Q8NBD8	167 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	FAM216A	Q8WUB2	273 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	DYRK2	Q92630	601 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	GCDH	Q92947	438 aa	Predicted RBP	11.21	□□□□□ -0.61
APTX-231	ENST00000494973	TRIM63	Q969Q1	353 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	GALM	Q96C23	342 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	C7orf50	Q9BRJ6	194 aa	Known RBP	11.21	□□□□□ -0.61
APTX-231	ENST00000494973	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.21	□□□□□ -0.61
APTX-231	ENST00000494973	ST6GALNAC5	Q9BVH7	336 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	ING3	Q9NXR8	418 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	ANXA10	Q9UJ72	324 aa		11.21	□□□□□ -0.61
APTX-231	ENST00000494973	CREBBP	Q92793	2442 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	MALRD1	Q5VYJ5	2156 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	MEIOC	A2RUB1	952 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973		M0R1W7	72 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	FABP7	O15540	132 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	UPK1B	O75841	260 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	ZNF728	P0DKX0	622 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	PPIAL4G	P0DN37	164 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	PTHLH	P12272	177 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	IL7	P13232	177 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	IL2RG	P31785	369 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	OR3A3	P47888	321 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	DEFA1	P59665	94 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	DEFA3	P59666	94 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	RNASE12	Q5GAN4	147 aa	Known RBP	11.2	□□□□□ -0.62
APTX-231	ENST00000494973	RNASE10	Q5GAN6	216 aa	Known RBP	11.2	□□□□□ -0.62
APTX-231	ENST00000494973	OR52W1	Q6IF63	320 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	C16orf87	Q6PH81	154 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	TMEM17	Q86X19	198 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	KRTAP1-3	Q8IUG1	177 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	LY6G5B	Q8NDX9	201 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	OR5AP2	Q8NGF4	316 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	OR5H2	Q8NGV7	314 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	MRGPRD	Q8TDS7	321 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	C1orf159	Q96HA4	380 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	COX4I2	Q96KJ9	171 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	LINC00574	Q9H8X3	128 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	C19orf12	Q9NSK7	152 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	NECAP2	Q9NVZ3	263 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	CALY	Q9NYX4	217 aa		11.2	□□□□□ -0.62
APTX-231	ENST00000494973	ELF5	Q9UKW6	265 aa	Predicted RBP	11.2	□□□□□ -0.62
APTX-231	ENST00000494973	PRRC2A	P48634	2157 aa	Known RBP	11.2	□□□□□ -0.62
APTX-231	ENST00000494973	TRAV20	A0A0B4J274	112 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	IGHV2-70D	A0A0C4DH43	119 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	ANKRD20A5P	A0PJZ0	165 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	NAP1L6	A6NFF2	107 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.19	□□□□□ -0.62
APTX-231	ENST00000494973	RGS11	O94810	467 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	MSMB	P08118	114 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	AKAIN1	P0CW23	69 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	HTD2	P86397	168 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	DYRK1A	Q13627	763 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	ZNF57	Q68EA5	555 aa	Predicted RBP	11.19	□□□□□ -0.62
APTX-231	ENST00000494973	C1orf122	Q6ZSJ8	110 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	RTN4RL2	Q86UN3	420 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	TPRX1	Q8N7U7	411 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	LINC01356	Q8N9X3	169 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	OR52M1	Q8NGK5	317 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	OR13A1	Q8NGR1	328 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	CCDC107	Q8WV48	283 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	ARL11	Q969Q4	196 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	CABLES2	Q9BTV7	478 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	TAF9B	Q9HBM6	251 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	KLK11	Q9UBX7	282 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	JPT1	Q9UK76	154 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	KPTN	Q9Y664	436 aa		11.19	□□□□□ -0.62
APTX-231	ENST00000494973	ASH1L	Q9NR48	2969 aa	Known RBP	11.19	□□□□□ -0.62
APTX-231	ENST00000494973	DSCAML1	Q8TD84	2053 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973		A0A096LNT2	108 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	MEIS3P1	A6NDR6	274 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	DISC1	C4P0D8	188 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	C12orf77	C9JDV5	145 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	NPIPB11	E5RHQ5	1161 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	RNF223	E7ERA6	249 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	PHF1	O43189	567 aa	Predicted RBP	11.18	□□□□□ -0.62
APTX-231	ENST00000494973	CD74	P04233	296 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	IFNA6	P05013	189 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	RCC1	P18754	421 aa	Predicted RBP	11.18	□□□□□ -0.62
APTX-231	ENST00000494973	FPR2	P25090	351 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	SEC61A1	P61619	476 aa	Known RBP	11.18	□□□□□ -0.62
APTX-231	ENST00000494973	DCTN2	Q13561	401 aa	Known RBP	11.18	□□□□□ -0.62
APTX-231	ENST00000494973	CDK10	Q15131	360 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973		Q3ZCU0	254 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	VAX1	Q5SQQ9	334 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	TMEM200B	Q69YZ2	307 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	STEAP1B	Q6NZ63	245 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	HEPN1	Q6WQI6	88 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	ARRDC1	Q8N5I2	433 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	GVQW1	Q8N7I0	195 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	SDHC	Q99643	169 aa	Predicted RBP	11.18	□□□□□ -0.62
APTX-231	ENST00000494973	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.18	□□□□□ -0.62
APTX-231	ENST00000494973	CCDC168	Q8NDH2	2452 aa		11.18	□□□□□ -0.62
APTX-231	ENST00000494973	ITPR2	Q14571	2701 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms