RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, human

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-223	ENST00000494123	GZMH	P20718	246 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	GNG2	P59768	71 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	ZNF260	Q3ZCT1	412 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	FAM120AOS	Q5T036	256 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	HACD4	Q5VWC8	232 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	MOB1B	Q7L9L4	216 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	LAX1	Q8IWV1	398 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123		Q8N7P7	452 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	RAB9B	Q9NP90	201 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	TMEM160	Q9NX00	188 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	CALY	Q9NYX4	217 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	EXTL2	Q9UBQ6	330 aa		11.96	□□□□□ -0.5
BRCA1-223	ENST00000494123	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	AVP	P01185	164 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	RBP4	P02753	201 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	MMP9	P14780	707 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	RCC1	P18754	421 aa	Predicted RBP	11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	SSTR5	P35346	364 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	DLX6	P56179	175 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	TAS2R20	P59543	309 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	ERVFRD-1	P60508	538 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	PITPNA	Q00169	270 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	PNLIPRP3	Q17RR3	467 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	ZNF782	Q6ZMW2	699 aa	Predicted RBP	11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	ARL11	Q969Q4	196 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	TBX15	Q96SF7	602 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	NXF2	Q9GZY0	626 aa	Known RBP	11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	MMP27	Q9H306	513 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	AUNIP	Q9H7T9	357 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	OPN4	Q9UHM6	478 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	ELF5	Q9UKW6	265 aa	Predicted RBP	11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	MRPS7	Q9Y2R9	242 aa	Known RBP	11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	HIVEP2	P31629	2446 aa		11.95	□□□□□ -0.5
BRCA1-223	ENST00000494123	SPINT2	O43291	252 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	ORC5	O43913	435 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	IGHV1-8	P0DP01	117 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	OMG	P23515	440 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	PRTN3	P24158	256 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	S100A5	P33763	92 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	C17orf58	Q2M2W7	97 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	PRAMEF5	Q5TYX0	476 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	PRR18	Q8N4B5	295 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	NANP	Q8TBE9	248 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	NUDCD2	Q8WVJ2	157 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	LHX4	Q969G2	390 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	UPRT	Q96BW1	309 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	MIXL1	Q9H2W2	232 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	MGAT4A	Q9UM21	535 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	A3GALT2	U3KPV4	340 aa		11.94	□□□□□ -0.5
BRCA1-223	ENST00000494123	TRBV6-6	A0A0A6YYG2	114 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	TRAV40	A0A0B4J280	105 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	POM121C	A8CG34	1229 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	C12orf77	C9JDV5	145 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	SRP14	P37108	136 aa	Known RBP	11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	MADCAM1	Q13477	382 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	LTC4S	Q16873	150 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	GPR157	Q5UAW9	335 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	NCR3LG1	Q68D85	454 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	OR52W1	Q6IF63	320 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	CNIH2	Q6PI25	160 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	HEPN1	Q6WQI6	88 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	IL17REL	Q6ZVW7	336 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	C11orf42	Q8N5U0	333 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	RFESD	Q8TAC1	157 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	UBALD1	Q8TB05	177 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	DIRAS2	Q96HU8	199 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	BEX2	Q9BXY8	128 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	HEXA-AS1	Q9H8Q6	139 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	TAF9B	Q9HBM6	251 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	MBNL3	Q9NUK0	354 aa	Known RBP	11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	SESN1	Q9Y6P5	492 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	INAFM1	C9JVW0	142 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	FCGR3A	P08637	254 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	CGB3	P0DN86	165 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	CGB7	P0DN87	165 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	NFYB	P25208	207 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	DLX1	P56177	255 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	PRB3	Q04118	309 aa	Predicted RBP	11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	ZNF880	Q6PDB4	577 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	ZNF554	Q86TJ5	538 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	SNX29P2	Q8IUI4	249 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	PDZD9	Q8IXQ8	264 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	UNKL	Q9H9P5	680 aa	Known RBP	11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123		Q9N2K0	584 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	IDI2-AS1	Q9NZ38	188 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	CDC42EP3	Q9UKI2	254 aa		11.93	□□□□□ -0.5
BRCA1-223	ENST00000494123	IGHV3OR16-10	A0A075B7F0	116 aa		11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	NPIPB11	E5RHQ5	1161 aa		11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	C15orf65	H3BRN8	121 aa		11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	HBZ	P02008	142 aa		11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	MELTF	P08582	738 aa		11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	PTHLH	P12272	177 aa		11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	HOXB4	P17483	251 aa	Predicted RBP	11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	DTYMK	P23919	212 aa		11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	COX7A1	P24310	79 aa		11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	GUCA2A	Q02747	115 aa		11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	KLRD1	Q13241	179 aa		11.92	□□□□□ -0.5
BRCA1-223	ENST00000494123	BAIAP2L2	Q6UXY1	529 aa		11.92	□□□□□ -0.5

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