RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ARPC4P59998 168 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 RPL31P62899 125 aaKnown RBP9.44□□□□□ -0.9
MCF2L-231ENST00000494043 MEF2CQ06413 473 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-231ENST00000494043 MEF2DQ14814 521 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 CDK10Q15131 360 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 CLEC12BQ2HXU8 276 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 RNASE10Q5GAN6 216 aaKnown RBP9.44□□□□□ -0.9
MCF2L-231ENST00000494043 VAX1Q5SQQ9 334 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 WDR25Q64LD2 544 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-231ENST00000494043 TRAT1Q6PIZ9 186 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 TCF23Q7RTU1 214 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 ZNF554Q86TJ5 538 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 POC5Q8NA72 575 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 OR4D10Q8NGI6 311 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 OR4C16Q8NGL9 310 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 OR5H2Q8NGV7 314 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 CLDND2Q8NHS1 167 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 H1FXQ92522 213 aaKnown RBP9.44□□□□□ -0.9
MCF2L-231ENST00000494043 DCTN5Q9BTE1 182 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 TINAGL1Q9GZM7 467 aaPredicted RBP9.44□□□□□ -0.9
MCF2L-231ENST00000494043 HRASLSQ9HDD0 168 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 KCNIP1Q9NZI2 227 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 LPAR3Q9UBY5 353 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 CLN8Q9UBY8 286 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 ARID1AO14497 2285 aa9.44□□□□□ -0.9
MCF2L-231ENST00000494043 TRGV10A0A0A0MS01 117 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 TRBV23-1A0A0A0MS06 115 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 hADV38S2A0JD32 116 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 NAP1L6A6NFF2 107 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 CENPXA8MT69 81 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 C12orf77C9JDV5 145 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 PMP2P02689 132 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 SCTP09683 121 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 GSTT2P0CG29 244 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 SLC25A16P16260 332 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 SSTR5P35346 364 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 OR3A3P47888 321 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 SEC61A1P61619 476 aaKnown RBP9.43□□□□□ -0.9
MCF2L-231ENST00000494043 LMO4P61968 165 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 RGS21Q2M5E4 152 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 CR1LQ2VPA4 569 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 ESCO2Q56NI9 601 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 FAAP20Q6NZ36 180 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 MZT2BQ6NZ67 158 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 C5orf24Q7Z6I8 188 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 OR4A4PQ8NGN8 299 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 CORO2AQ92828 525 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 CABLES2Q9BTV7 478 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 SSBP3Q9BWW4 388 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-231ENST00000494043 TAF9BQ9HBM6 251 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 C19orf12Q9NSK7 152 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 NECAP2Q9NVZ3 263 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 EHFQ9NZC4 300 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 OPN4Q9UHM6 478 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 UBE2J1Q9Y385 318 aaPredicted RBP9.43□□□□□ -0.9
MCF2L-231ENST00000494043 LINC00312Q9Y6C7 94 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 ITPR2Q14571 2701 aa9.43□□□□□ -0.9
MCF2L-231ENST00000494043 IGHV4-61A0A0C4DH41 118 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 IGKV1-6A0A0C4DH72 117 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 MEX3AA1L020 520 aaKnown RBP9.42□□□□□ -0.9
MCF2L-231ENST00000494043 C15orf65H3BRN8 121 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 DIRAS3O95661 229 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 PTTG1O95997 202 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 AMY2AP04746 511 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 ZNF735P0CB33 412 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 CGB3P0DN86 165 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 CGB7P0DN87 165 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 GZMHP20718 246 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 BTCP35070 178 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 RFX2P48378 723 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 GNB2P62879 340 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 ZNF273Q14593 569 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 HERPUD1Q15011 391 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 C11orf91Q3C1V1 193 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 Q5PR19 223 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 BTN2A1Q7KYR7 527 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 OVCH2Q7RTZ1 564 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 FAM185AQ8N0U4 392 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 ZNF565Q8N9K5 539 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 OR56B4Q8NH76 319 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 OR1L1Q8NH94 360 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 C8orf46Q8TAG6 207 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 RAB39BQ96DA2 213 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 KIRREL1Q96J84 757 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 MCUBQ9NWR8 336 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 CALYQ9NYX4 217 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 PDZD2O15018 2839 aa9.42□□□□□ -0.9
MCF2L-231ENST00000494043 CSMD2Q7Z408 3487 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 ZNF729A6NN14 1252 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-231ENST00000494043 KIAA1324LA8MWY0 1029 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-231ENST00000494043 A8MXK9 166 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 DISC1C4P0D8 188 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 C22orf46C9J442 243 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 NPIPB11E5RHQ5 1161 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 SDCBPO00560 298 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-231ENST00000494043 BET1O15155 118 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 PHF1O43189 567 aaPredicted RBP9.41□□□□□ -0.9
MCF2L-231ENST00000494043 SPINT2O43291 252 aa9.41□□□□□ -0.9
MCF2L-231ENST00000494043 HBZP02008 142 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms