RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 KIRREL1Q96J84 757 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 MEGF10Q96KG7 1140 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 SLC5A7Q9GZV3 580 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 TAAR3PQ9P1P4 343 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 OR14J1Q9UGF5 321 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 METRNQ9UJH8 293 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 TUBD1Q9UJT1 453 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 MEMO1Q9Y316 297 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 WIPI2Q9Y4P8 454 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 ACACBO00763 2458 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 ZZEF1O43149 2961 aa8.97□□□□□ -0.97
CLCN6-208ENST00000494028 USP24Q9UPU5 2620 aa8.96□□□□□ -0.97
CLCN6-208ENST00000494028 TRAV39A0A0B4J263 110 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 KANTRA0A1W2PQU2 76 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 hCG_1807616A0A1W2PRN6 198 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 SRRM5B3KS81 715 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 SPDEFO95238 335 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 NMBP08949 121 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 CD40P25942 277 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 LUMP51884 338 aaPredicted RBP8.96□□□□□ -0.98
CLCN6-208ENST00000494028 SRPXP78539 464 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 SPRNQ5BIV9 151 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 BEX5Q5H9J7 111 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 VHLLQ6RSH7 139 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 ZNF565Q8N9K5 539 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 OR2Z1Q8NG97 314 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 OR10Z1Q8NGY1 313 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 OR1S1Q8NH92 325 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 GLYATL2Q8WU03 294 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 AQP10Q96PS8 301 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 DMRTA2Q96SC8 542 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 USB1Q9BQ65 265 aaKnown RBP8.96□□□□□ -0.98
CLCN6-208ENST00000494028 MRPL37Q9BZE1 423 aaKnown RBP8.96□□□□□ -0.98
CLCN6-208ENST00000494028 CCL28Q9NRJ3 127 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 ELOVL5Q9NYP7 299 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 KIF25Q9UIL4 384 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 FBXO9Q9UK97 447 aaPredicted RBP8.96□□□□□ -0.98
CLCN6-208ENST00000494028 PCDHB10Q9UN67 800 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 KCNIP3Q9Y2W7 256 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 SPEF1Q9Y4P9 236 aa8.96□□□□□ -0.98
CLCN6-208ENST00000494028 MAP1BP46821 2468 aaKnown RBP8.95□□□□□ -0.98
CLCN6-208ENST00000494028 C3orf85A0A1B0GTC6 90 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 LEUTXA8MZ59 168 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 H0Y980 276 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 HSD17B6O14756 317 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 MPPED1O15442 326 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 IFNA21P01568 189 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 THBDP07204 575 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 WNT2P09544 360 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 UCP1P25874 307 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 RBPJQ06330 500 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 TESK1Q15569 626 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 SLC35E4Q6ICL7 350 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 MEX3BQ6ZN04 569 aaKnown RBP8.95□□□□□ -0.98
CLCN6-208ENST00000494028 LYZL2Q7Z4W2 148 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 COMMD7Q86VX2 200 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 SLC35G3Q8N808 338 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 KDF1Q8NAX2 398 aaPredicted RBP8.95□□□□□ -0.98
CLCN6-208ENST00000494028 NUP37Q8NFH4 326 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 STOML3Q8TAV4 291 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 UBALD1Q8TB05 177 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 ZCCHC14Q8WYQ9 949 aaKnown RBP8.95□□□□□ -0.98
CLCN6-208ENST00000494028 CXorf58Q96LI9 332 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 CNTNAP3BQ96NU0 1288 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 ARPC5LQ9BPX5 153 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 CNTNAP3Q9BZ76 1288 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 GSX2Q9BZM3 304 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 PARP12Q9H0J9 701 aaKnown RBP8.95□□□□□ -0.98
CLCN6-208ENST00000494028 TMEM222Q9H0R3 208 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 DNAJB11Q9UBS4 358 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 TRAPPC2LQ9UL33 140 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 OR2W1Q9Y3N9 320 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 TPRP12270 2363 aaKnown RBP8.95□□□□□ -0.98
CLCN6-208ENST00000494028 DSCAML1Q8TD84 2053 aa8.95□□□□□ -0.98
CLCN6-208ENST00000494028 PKD1L2Q7Z442 2459 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 C16orf97H3BN30 126 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 KCNAB3O43448 404 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 DEDDO75618 318 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 CFHR2P36980 270 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 PAX5Q02548 391 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 COL10A1Q03692 680 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 TMEM268Q5VZI3 342 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 FAM90A1Q86YD7 464 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 WFDC8Q8IUA0 241 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 GCSAMQ8N6F7 178 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 CD177Q8N6Q3 437 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 INO80EQ8NBZ0 244 aaPredicted RBP8.94□□□□□ -0.98
CLCN6-208ENST00000494028 BVESQ8NE79 360 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 OR10V1Q8NGI7 309 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 OR4D5Q8NGN0 318 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 OR10J5Q8NHC4 309 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 LILRB1Q8NHL6 650 aaPredicted RBP8.94□□□□□ -0.98
CLCN6-208ENST00000494028 ITLN1Q8WWA0 313 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 IL1F10Q8WWZ1 152 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 TMEM56Q96MV1 263 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 OR2V2Q96R30 315 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 GPHA2Q96T91 129 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 ZNF471Q9BX82 626 aaPredicted RBP8.94□□□□□ -0.98
CLCN6-208ENST00000494028 DNTTIP1Q9H147 329 aa8.94□□□□□ -0.98
CLCN6-208ENST00000494028 TAF9BQ9HBM6 251 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms