RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SRSF3P84103 164 aaKnown RBP6.96□□□□□ -1.3
HDAC6-234ENST00000493923 POU3F1Q03052 451 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-234ENST00000493923 CLINT1Q14677 625 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF674Q2M3X9 581 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 SCGB2B2Q4G0G5 96 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 KHDC3LQ587J8 217 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 GGNBP1Q5YKI7 109 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 BTNL3Q6UXE8 466 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 SLC16A14Q7RTX9 510 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 LRP11Q86VZ4 500 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 CPOQ8IVL8 374 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 FAM24BQ8N5W8 94 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 CCDC54Q8NEL0 328 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 SEMA6DQ8NFY4 1073 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 OR8G5Q8NG78 346 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 OR14K1Q8NGZ2 314 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 NEK7Q8TDX7 302 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 MITD1Q8WV92 249 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 TMED6Q8WW62 240 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 DCUN1D4Q92564 292 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 MSI2Q96DH6 328 aaKnown RBP6.96□□□□□ -1.3
HDAC6-234ENST00000493923 AKR1E2Q96JD6 320 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 C4orf36Q96KX1 117 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 YPEL4Q96NS1 127 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 MCHR1Q99705 422 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 PLA2G12AQ9BZM1 189 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 PRO1933Q9H354 126 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 PLK3Q9H4B4 646 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 OBP2BQ9NPH6 170 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 HINT3Q9NQE9 182 aaKnown RBP6.96□□□□□ -1.3
HDAC6-234ENST00000493923 SLC2A8Q9NY64 477 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 KCNG2Q9UJ96 466 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 STARD10Q9Y365 291 aa6.96□□□□□ -1.3
HDAC6-234ENST00000493923 AK6Q9Y3D8 172 aaKnown RBP6.96□□□□□ -1.3
HDAC6-234ENST00000493923 SIRT4Q9Y6E7 314 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-234ENST00000493923 LOC102725191A0A1B0GVB3 256 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 IFITM10A6NMD0 228 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 CPSF4LA6NMK7 179 aaKnown RBP6.95□□□□□ -1.3
HDAC6-234ENST00000493923 RIIAD1A6NNX1 92 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 RNF212BA8MTL3 300 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 UMAD1C9J7I0 102 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 PPP5D1E7EU14 171 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 PIP5K1CO60331 668 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 CST4P01036 141 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 PMP2P02689 132 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 OR2T7P0C7T2 308 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 B4GALT1P15291 398 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 USF1P22415 310 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-234ENST00000493923 PDLIM4P50479 330 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF84P51523 738 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 ATP1B3P54709 279 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 DSCR9P59020 149 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 ERVFC1-1P60608 527 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 MRPS11P82912 194 aaKnown RBP6.95□□□□□ -1.3
HDAC6-234ENST00000493923 DHRS2Q13268 280 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 EFNB3Q15768 340 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 IQCJQ1A5X6 159 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 CYB5R2Q6BCY4 276 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 PRSS54Q6PEW0 395 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 ULK3Q6PHR2 472 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 UNQ6126/PRO20091Q6UXV3 157 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 MBOAT2Q6ZWT7 520 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 ABHD12BQ7Z5M8 362 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-234ENST00000493923 SLC25A42Q86VD7 318 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 ZNF573Q86YE8 665 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 PAQR4Q8N4S7 273 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-234ENST00000493923 OR2T27Q8NH04 317 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 MRGPRDQ8TDS7 321 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 CORO2AQ92828 525 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 RAB39BQ96DA2 213 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 OR14A2Q96R54 314 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 PRSS27Q9BQR3 290 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 TMEM208Q9BTX3 173 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 SUCNR1Q9BXA5 334 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 BPESC1Q9GZL8 116 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 SLC35B3Q9H1N7 401 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 SPACA1Q9HBV2 294 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 CYTL1Q9NRR1 136 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 FAM212BQ9NTI7 297 aaPredicted RBP6.95□□□□□ -1.3
HDAC6-234ENST00000493923 FZR1Q9UM11 496 aa6.95□□□□□ -1.3
HDAC6-234ENST00000493923 A0A087WUU8 490 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 B9A039 149 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 RAB27BO00194 218 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 PHOX2AO14813 284 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 WNT9BO14905 357 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 PHF1O43189 567 aaPredicted RBP6.94□□□□□ -1.3
HDAC6-234ENST00000493923 CDC14BO60729 498 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 LILRA1O75019 489 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 JTBO76095 146 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 CH25HO95992 272 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 HLA-AP01891 365 aaKnown RBP6.94□□□□□ -1.3
HDAC6-234ENST00000493923 CRYAAP02489 173 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 PGAM2P15259 253 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 TBPP20226 339 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 PYCR1P32322 319 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 RBMXP38159 391 aaKnown RBP6.94□□□□□ -1.3
HDAC6-234ENST00000493923 BIDP55957 195 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 CLDN12P56749 244 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 FAM3AP98173 230 aa6.94□□□□□ -1.3
HDAC6-234ENST00000493923 PIN1Q13526 163 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms