RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 WDR25Q64LD2 544 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-222ENST00000493919 RTL6Q6ICC9 239 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 ZGRF1Q86YA3 2104 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 C20orf196Q8IYI0 205 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 C10orf111Q8N326 155 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 RNF152Q8N8N0 203 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 GALMQ96C23 342 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 MUCL1Q96DR8 90 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 MEPEQ9NQ76 525 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-222ENST00000493919 NDUFB11Q9NX14 153 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 FKBP11Q9NYL4 201 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 FASNP49327 2511 aaKnown RBP10.01□□□□□ -0.81
BRCA1-222ENST00000493919 TRGV5A0A0B4J1U4 118 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 IFITM5A6NNB3 132 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 F5H5P2 479 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 J3QR06 171 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 TNFRSF11BO00300 401 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 NUDT14O95848 222 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 GPR6P46095 362 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-222ENST00000493919 CRISP3P54108 245 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 PRDX4Q13162 271 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 WIPI1Q5MNZ9 446 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-222ENST00000493919 FAM78BQ5VT40 261 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 GLDNQ6ZMI3 551 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-222ENST00000493919 SLC38A5Q8WUX1 472 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 CRIM1Q9NZV1 1036 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 VDAC3Q9Y277 283 aa10.01□□□□□ -0.81
BRCA1-222ENST00000493919 A0A1W2PQD3 144 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 GAGE12BA1L429 117 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 FAM157AC9JC47 383 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 H3BML4 177 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 FXYD1O00168 92 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 TNFRSF6BO95407 300 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 OPN1SWP03999 348 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 PSG1P11464 419 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 GABRA2P47869 451 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 ZNF117Q03924 483 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 SMN1Q16637 294 aaKnown RBP10□□□□□ -0.81
BRCA1-222ENST00000493919 ZNF626Q68DY1 528 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 FER1L6-AS1Q8NA97 138 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 CHST4Q8NCG5 386 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 OR2M3Q8NG83 312 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 OR52B4Q8NGK2 314 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 NFKBIDQ8NI38 313 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 MARCH1Q8TCQ1 289 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 LRRC58Q96CX6 371 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 SEH1LQ96EE3 360 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 KIRREL1Q96J84 757 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 KCTD7Q96MP8 289 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 NKX3-1Q99801 234 aaPredicted RBP10□□□□□ -0.81
BRCA1-222ENST00000493919 RHNO1Q9BSD3 238 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 QTRT1Q9BXR0 403 aaKnown RBP10□□□□□ -0.81
BRCA1-222ENST00000493919 PLEKHA1Q9HB21 404 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 NECAP2Q9NVZ3 263 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 VPREB3Q9UKI3 123 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 DNAJC13O75165 2243 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 FREM3P0C091 2139 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 ESPL1Q14674 2120 aa10□□□□□ -0.81
BRCA1-222ENST00000493919 TRGV8A0A0C4DH27 118 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 SERINC4A6NH21 518 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 GABRPO00591 440 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 UPK3AO75631 287 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 WISP1O95388 367 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 IGHG3P01860 377 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 HPNP05981 417 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 ACHEP22303 614 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 ART1P52961 327 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 RPS23P62266 143 aaKnown RBP9.99□□□□□ -0.81
BRCA1-222ENST00000493919 SELENOWP63302 87 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 TMEM128Q5BJH2 165 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 CST9LP1Q5W188 147 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 UEVLDQ8IX04 471 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 OR8I2Q8N0Y5 310 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 OR5AP2Q8NGF4 316 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 GPR119Q8TDV5 335 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 C15orf40Q8WUR7 153 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 ZG16BQ96DA0 208 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 ACY3Q96HD9 319 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 KCNK17Q96T54 332 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 ZNF649Q9BS31 505 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 A4GALTQ9NPC4 353 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 TXNL4BQ9NX01 149 aaKnown RBP9.99□□□□□ -0.81
BRCA1-222ENST00000493919 TAS2R5Q9NYW4 299 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 SLC45A2Q9UMX9 530 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 LAMTOR2Q9Y2Q5 125 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 OOEPA6NGQ2 149 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 TNFRSF13BO14836 293 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-222ENST00000493919 TMEM50AO95807 157 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 DBHP09172 617 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 AQP1P29972 269 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 DSCR4P56555 118 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-222ENST00000493919 HIST1H3AP68431 136 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 RUNX1Q01196 453 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 MELKQ14680 651 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 ZNF141Q15928 474 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 C1QL3Q5VWW1 255 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 CBLN3Q6UW01 205 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 IZUMO1Q8IYV9 350 aa9.99□□□□□ -0.81
BRCA1-222ENST00000493919 TOMM5Q8N4H5 51 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms