RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ZNF182P17025 639 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 COX7A1P24310 79 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 UTF1Q5T230 341 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 HCP5Q6MZN7 132 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 IZUMO1Q8IYV9 350 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 GAPTQ8N292 157 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 KCTD12Q96CX2 325 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 GAL3ST2Q9H3Q3 398 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 NCOR1P1Q9H4R4 102 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 CHMP1AQ9HD42 196 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 TAS2R3Q9NYW6 316 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 CALYQ9NYX4 217 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 RSL24D1Q9UHA3 163 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 NF1P21359 2839 aa14.62□□□□□ -0.07
PDLIM7-208ENST00000493815 KBTBD11-OT1A0A1B0GTJ5 212 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 hCG_1809904A0A1W2PP81 198 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 A0A1W2PPE2 198 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 A0A1W2PR64 198 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 A0A1W2PRV1 198 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 MFNGO00587 321 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 TMEM127O75204 238 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 CLPXO76031 633 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 FAM189A2Q15884 450 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 CDNFQ49AH0 187 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 GPR157Q5UAW9 335 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 PRR18Q8N4B5 295 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 SETD6Q8TBK2 473 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 ZNF69Q9UC07 566 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 ZNF729A6NN14 1252 aaPredicted RBP14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 HPGDSO60760 199 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 CA11O75493 328 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 EIF4EP06730 217 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 SOX6P35712 828 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 UBE2NLQ5JXB2 153 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 FAM53AQ6NSI3 398 aaPredicted RBP14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 BCL6BQ8N143 479 aaPredicted RBP14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 ARL11Q969Q4 196 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 PHF21AQ96BD5 680 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 CMSS1Q9BQ75 279 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 DCUN1D5Q9BTE7 237 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 SUCNR1Q9BXA5 334 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 UNKLQ9H9P5 680 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 NUP50Q9UKX7 468 aa14.61□□□□□ -0.07
PDLIM7-208ENST00000493815 NAV3Q8IVL0 2385 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 TRAV18A0A075B6X5 111 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 IGHV1-69DA0A0B4J2H0 117 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 C12orf77C9JDV5 145 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 NAPSAO96009 420 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 IGHV1-69P01742 117 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 IGHV3-7P01780 117 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 EPHA1P21709 976 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 NFYBP25208 207 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 MADCAM1Q13477 382 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 FOXB2Q5VYV0 432 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 HEPN1Q6WQI6 88 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 ABCG5Q9H222 651 aa14.6□□□□□ -0.07
PDLIM7-208ENST00000493815 TMEM235A6NFC5 223 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 C15orf65H3BRN8 121 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 RBP4P02753 201 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 PTHLHP12272 177 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 GZMHP20718 246 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 PIP4P2Q8N4L2 257 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 ACOT12Q8WYK0 555 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 AP3S1Q92572 193 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 LEAP2Q969E1 77 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 KIRREL1Q96J84 757 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 C12orf4Q9NQ89 552 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 SESN1Q9Y6P5 492 aa14.59□□□□□ -0.07
PDLIM7-208ENST00000493815 CD3GP09693 182 aa14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 NCR3LG1Q68D85 454 aa14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 TEX29Q8N6K0 151 aa14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 OR1L1Q8NH94 360 aa14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 MAFIPQ8WZ33 124 aa14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 S100A16Q96FQ6 103 aaKnown RBP14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 MS4A7Q9GZW8 240 aaPredicted RBP14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 HEXA-AS1Q9H8Q6 139 aa14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 TAF9BQ9HBM6 251 aa14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 MBNL3Q9NUK0 354 aaKnown RBP14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 CCDC59Q9P031 241 aaKnown RBP14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 ZNF230Q9UIE0 474 aaPredicted RBP14.58□□□□□ -0.07
PDLIM7-208ENST00000493815 IGHV3-43A0A0B4J1X8 118 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 SMIM31A0A1B0GVY4 71 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 SERPINE3A8MV23 424 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 NPIPB11E5RHQ5 1161 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 HBZP02008 142 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 FAM157CP0CG43 387 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 IGHV3-43DP0DP04 118 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 ELK1P19419 428 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 ARFRP1Q13795 201 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 ZNF260Q3ZCT1 412 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 MZT2AQ6P582 158 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 NUDCD2Q8WVJ2 157 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 TMEM133Q9H2Q1 129 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 LINC00574Q9H8X3 128 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 DIABLOQ9NR28 239 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 IDI2-AS1Q9NZ38 188 aa14.58□□□□□ -0.08
PDLIM7-208ENST00000493815 MDFIC2A0A1B0GVS7 189 aa14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 CTDSP2O14595 271 aa14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 RGS5O15539 181 aa14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 ORC5O43913 435 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms