RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 IL20Q9NYY1 176 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 MYO10Q9HD67 2058 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 KLK8O60259 260 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 MOSPD3O75425 235 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 RECKO95980 971 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 KLKB1P03952 638 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 SEC11BP0C7V7 166 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 RBMY1A1P0DJD3 496 aaKnown RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 RBMY1CP0DJD4 496 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 CCL2P13500 99 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 ANOS1P23352 680 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 FCGR2BP31994 310 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 SUMO2P61956 95 aaKnown RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 B4GALNT1Q00973 533 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 TRA2AQ13595 282 aaKnown RBP eCLIP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 MOGAT3Q86VF5 341 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 MARVELD1Q9BSK0 173 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 SMDT1Q9H4I9 107 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 AURKAIP1Q9NWT8 199 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 CLN8Q9UBY8 286 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 ADAMTS5Q9UNA0 930 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 IGKV3OR2-268A0A0C4DH90 116 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 ZFPL1O95159 310 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 EIF3IQ13347 325 aaKnown RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 CLPPQ16740 277 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF324BQ6AW86 544 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 H1FOOQ8IZA3 346 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF418Q8TF45 676 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 MRPL16Q9NX20 251 aaKnown RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 TMEM56-RWDD3S4R434 201 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 MYO5BQ9ULV0 1848 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 TCRBV16S1A1N1A0A5B0 115 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 J3QR06 171 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 PPM1DO15297 605 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 CDS2O95674 445 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 BCL2P10415 239 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 NAT2P11245 290 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 PSG9Q00887 426 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 FZD5Q13467 585 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 TMEM95Q3KNT9 176 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 FOXB2Q5VYV0 432 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 OR1P1Q8NH06 330 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 OR10AG1Q8NH19 301 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 WFDC5Q8TCV5 224 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 PTPMT1Q8WUK0 201 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 RGP1Q92546 391 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 TMEM101Q96IK0 257 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 CCL28Q9NRJ3 127 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 PRR13Q9NZ81 148 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 PEF1Q9UBV8 284 aaKnown RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 S1PR2O95136 353 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 APELAP0DMC3 54 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 LAMTOR1Q6IAA8 161 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 OR8G5Q8NG78 346 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 OR4A5Q8NH83 315 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 SHISA4Q96DD7 197 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 CNRIP1Q96F85 164 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-221ENST00000493795 RARRES2Q99969 163 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 SLIRPQ9GZT3 109 aaKnown RBP6.91□□□□□ -1.3
BRCA1-221ENST00000493795 C3P01024 1663 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 IGHV3-21A0A0B4J1V1 117 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 TRAV39A0A0B4J263 110 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 PPYP01298 95 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 TMEM50BP56557 158 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 CX3CL1P78423 397 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 C10orf128Q5T292 105 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 MRPL24Q96A35 216 aaKnown RBP6.91□□□□□ -1.3
BRCA1-221ENST00000493795 MRGPRFQ96AM1 343 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 RHNO1Q9BSD3 238 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 OPN4Q9UHM6 478 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF107Q9UII5 783 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-221ENST00000493795 NKX2-6A6NCS4 301 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 TMEM262E9PQX1 116 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 SOD3P08294 240 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 FCGR3AP08637 254 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 ACVR1Q04771 509 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 ASB16Q96NS5 453 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 KIR2DL4Q99706 377 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 CITED2Q99967 270 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-221ENST00000493795 TMEM210A6NLX4 147 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 HKR1P10072 659 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 HIST1H1AQ02539 215 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-221ENST00000493795 KLF9Q13886 244 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-221ENST00000493795 TCF24Q7RTU0 167 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 UBALD2Q8IYN6 164 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 TEX29Q8N6K0 151 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 CCL4L1Q8NHW4 92 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 ZFP64Q9NPA5 681 aa6.91□□□□□ -1.3
BRCA1-221ENST00000493795 CICQ96RK0 1608 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-221ENST00000493795 TRGC1P0CF51 173 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 TSPOP30536 169 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 LDLRAD1Q5T700 205 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 ANKRD37Q7Z713 158 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 OR8B12Q8NGG6 310 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 OR52M1Q8NGK5 317 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 TMEM45BQ96B21 275 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 PGLYRP4Q96LB8 373 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms