RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ARHGAP32A7KAX9 2087 aa14.16□□□□□ -0.14
LIME1-208ENST00000493265 MALRD1Q5VYJ5 2156 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 KIR2DS1A0A191URI9 304 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 FABP12A6NFH5 140 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 CA11O75493 328 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 HLA-DQB1P01920 261 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 ERVFRD-1P60508 538 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 PAX2Q02962 417 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 PRB3Q04118 309 aaPredicted RBP14.15□□□□□ -0.14
LIME1-208ENST00000493265 LTC4SQ16873 150 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 PNLIPRP3Q17RR3 467 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 FAM131AQ6UXB0 335 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 ZNF565Q8N9K5 539 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 RFESDQ8TAC1 157 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 C8orf46Q8TAG6 207 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 ZNF714Q96N38 554 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 WDFY2Q96P53 400 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.15□□□□□ -0.14
LIME1-208ENST00000493265 POLR3KQ9Y2Y1 108 aaPredicted RBP14.15□□□□□ -0.14
LIME1-208ENST00000493265 INSIG2Q9Y5U4 225 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 LINC00312Q9Y6C7 94 aa14.15□□□□□ -0.14
LIME1-208ENST00000493265 A0A1W2PPH5 198 aa14.14□□□□□ -0.15
LIME1-208ENST00000493265 MEIOCA2RUB1 952 aa14.14□□□□□ -0.15
LIME1-208ENST00000493265 SSX5O60225 188 aa14.14□□□□□ -0.15
LIME1-208ENST00000493265 NAPSAO96009 420 aa14.14□□□□□ -0.15
LIME1-208ENST00000493265 ZNF728P0DKX0 622 aa14.14□□□□□ -0.15
LIME1-208ENST00000493265 PRSS3P35030 304 aa14.14□□□□□ -0.15
LIME1-208ENST00000493265 Q6ZPA2 131 aa14.14□□□□□ -0.15
LIME1-208ENST00000493265 ST6GALNAC5Q9BVH7 336 aa14.14□□□□□ -0.15
LIME1-208ENST00000493265 RIMS4Q9H426 269 aaPredicted RBP14.14□□□□□ -0.15
LIME1-208ENST00000493265 KCNIP1Q9NZI2 227 aa14.14□□□□□ -0.15
LIME1-208ENST00000493265 UBE2J1Q9Y385 318 aaPredicted RBP14.14□□□□□ -0.15
LIME1-208ENST00000493265 YLPM1P49750 1951 aaKnown RBP14.14□□□□□ -0.15
LIME1-208ENST00000493265 DOCK11Q5JSL3 2073 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 FCGR3AP08637 254 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 OMGP23515 440 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 SSTR5P35346 364 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 DLX1P56177 255 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 PAX5Q02548 391 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 C11orf91Q3C1V1 193 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 SPANXN2Q5MJ10 180 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 PRAMEF5Q5TYX0 476 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 METTL11BQ5VVY1 283 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 BAIAP2L2Q6UXY1 529 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 GAPTQ8N292 157 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 ARL11Q969Q4 196 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 DACT3Q96B18 629 aaPredicted RBP14.13□□□□□ -0.15
LIME1-208ENST00000493265 ABHD1Q96SE0 405 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 PCGF1Q9BSM1 259 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 GAL3ST2Q9H3Q3 398 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 CALYQ9NYX4 217 aa14.13□□□□□ -0.15
LIME1-208ENST00000493265 CUBNO60494 3623 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 RNF212BA8MTL3 300 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 C12orf77C9JDV5 145 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 MELTFP08582 738 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 PITPNAQ00169 270 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 PYDC2Q56P42 97 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 C6orf183Q5T699 404 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 ZNF782Q6ZMW2 699 aaPredicted RBP14.12□□□□□ -0.15
LIME1-208ENST00000493265 CCDC190Q86UF4 302 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 GVQW1Q8N7I0 195 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 OR1L1Q8NH94 360 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 CORO2AQ92828 525 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 NCOR1P1Q9H4R4 102 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 C7orf69Q9H7B7 122 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 TAF9BQ9HBM6 251 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 Q9N2K0 584 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 IFT46Q9NQC8 304 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 YAE1D1Q9NRH1 226 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 ABCA1O95477 2261 aa14.12□□□□□ -0.15
LIME1-208ENST00000493265 KBTBD11-OT1A0A1B0GTJ5 212 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 FAM172BPA6NC97 362 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 ZNF729A6NN14 1252 aaPredicted RBP14.11□□□□□ -0.15
LIME1-208ENST00000493265 CD5LO43866 347 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 MMP23AO75900 390 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 TOX4O94842 621 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 GZMHP20718 246 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 NFYBP25208 207 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 DLX6P56179 175 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 C17orf58Q2M2W7 97 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 PYHIN1Q6K0P9 492 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 MOB1BQ7L9L4 216 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 PDZD9Q8IXQ8 264 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 IL1F10Q8WWZ1 152 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 SIRT7Q9NRC8 400 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 MBNL3Q9NUK0 354 aaKnown RBP14.11□□□□□ -0.15
LIME1-208ENST00000493265 TAS2R3Q9NYW6 316 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 KCNS2Q9ULS6 477 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 AUP1Q9Y679 476 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 V9GYH0 126 aa14.11□□□□□ -0.15
LIME1-208ENST00000493265 TRBV6-6A0A0A6YYG2 114 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 hCG_1809904A0A1W2PP81 198 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 A0A1W2PPE2 198 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 A0A1W2PR64 198 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 A0A1W2PRV1 198 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 SPINT2O43291 252 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 HBZP02008 142 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 LPLP06858 475 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 DTYMKP23919 212 aa14.1□□□□□ -0.15
LIME1-208ENST00000493265 GDNFP39905 211 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms