RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 VDAC2P45880 294 aaPredicted RBP18.94■□□□□ 0.62
CTDSP1-211ENST00000492545 AWAT2Q6E213 333 aa18.94■□□□□ 0.62
CTDSP1-211ENST00000492545 LYPD6Q86Y78 171 aa18.94■□□□□ 0.62
CTDSP1-211ENST00000492545 C11orf44Q8N8P7 122 aa18.94■□□□□ 0.62
CTDSP1-211ENST00000492545 RFESDQ8TAC1 157 aa18.94■□□□□ 0.62
CTDSP1-211ENST00000492545 NEK7Q8TDX7 302 aa18.94■□□□□ 0.62
CTDSP1-211ENST00000492545 TOMM40LQ969M1 308 aa18.94■□□□□ 0.62
CTDSP1-211ENST00000492545 SLC25A33Q9BSK2 321 aa18.94■□□□□ 0.62
CTDSP1-211ENST00000492545 RCC2Q9P258 522 aaKnown RBP18.94■□□□□ 0.62
CTDSP1-211ENST00000492545 NKX1-2Q9UD57 310 aaPredicted RBP18.94■□□□□ 0.62
CTDSP1-211ENST00000492545 A0A1W2PP11 408 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 CA11O75493 328 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 MT-ND4P03905 459 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 GLAP06280 429 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 SSTR5P35346 364 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 RAB7AP51149 207 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 GPR50Q13585 617 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 SPHARQ15513 63 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 ZNF497Q6ZNH5 498 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 OCSTAMPQ9BR26 566 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 ZNF581Q9P0T4 197 aa18.93■□□□□ 0.62
CTDSP1-211ENST00000492545 FAM90A9PA6NNJ1 464 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 KCNAB3O43448 404 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 OPN1MWP04001 364 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 OPN1MW2P0DN77 364 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 OPN1MW3P0DN78 364 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 CD24P25063 80 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 Q3ZCU0 254 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 ACSM3Q53FZ2 586 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 UNQ9370/PRO34162Q6UXP9 181 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 NDUFA11Q86Y39 141 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 OR8H3Q8N146 312 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 C8orf31Q8N9H6 132 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 OR10X1Q8NGY0 326 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 PHYHIPQ92561 330 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 ARL11Q969Q4 196 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 TPRKBQ9Y3C4 175 aa18.92■□□□□ 0.62
CTDSP1-211ENST00000492545 CMYA5Q8N3K9 4069 aa18.91■□□□□ 0.62
CTDSP1-211ENST00000492545 UBBP0CG47 229 aa18.91■□□□□ 0.62
CTDSP1-211ENST00000492545 LTC4SQ16873 150 aa18.91■□□□□ 0.62
CTDSP1-211ENST00000492545 TMEM30BQ3MIR4 351 aa18.91■□□□□ 0.62
CTDSP1-211ENST00000492545 UTF1Q5T230 341 aa18.91■□□□□ 0.62
CTDSP1-211ENST00000492545 Q6ZS46 218 aa18.91■□□□□ 0.62
CTDSP1-211ENST00000492545 CST11Q9H112 138 aa18.91■□□□□ 0.62
CTDSP1-211ENST00000492545 VCX3BQ9H321 246 aa18.91■□□□□ 0.62
CTDSP1-211ENST00000492545 TRAV39A0A0B4J263 110 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 H0YHG0 523 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 C15orf65H3BRN8 121 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 AIPO00170 330 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 CD28P10747 220 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 MGMTP16455 207 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 FUT3P21217 361 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 GABPB1Q06547 395 aaPredicted RBP18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 RAB12Q6IQ22 244 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 TRAT1Q6PIZ9 186 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 LINC00311Q8N616 119 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 LEAP2Q969E1 77 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 OR5M11Q96RB7 305 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 SELENOIQ9C0D9 397 aa18.9■□□□□ 0.62
CTDSP1-211ENST00000492545 AQP4P55087 323 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 SLC35A2P78381 396 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 ABCA11PQ4W5N1 156 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 PDLIM3Q53GG5 364 aaPredicted RBP18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 C6orf183Q5T699 404 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 GLT8D1Q68CQ7 371 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 GAPTQ8N292 157 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 OR4F17Q8NGA8 305 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 NRG4Q8WWG1 115 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 OR4F4Q96R69 305 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 DUSP21Q9H596 190 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 ETAA1Q9NY74 926 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 TRAPPC2LQ9UL33 140 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 LSM2Q9Y333 95 aaKnown RBP18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 PEX16Q9Y5Y5 336 aa18.89■□□□□ 0.61
CTDSP1-211ENST00000492545 A0A1W2PPI3 338 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 SDCBPO00560 298 aaPredicted RBP18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 SPINT2O43291 252 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 CRTAPO75718 401 aaPredicted RBP18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 IGHV3-7P01780 117 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 GAPDHP04406 335 aaKnown RBP18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 MYF6P23409 242 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 GNG10P50151 68 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 CENPVQ7Z7K6 275 aaPredicted RBP18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 TMEM104Q8NE00 496 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 OR5AU1Q8NGC0 362 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 CCDC107Q8WV48 283 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 Q96M66 194 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 BANF2Q9H503 90 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 GFOD1Q9NXC2 390 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 MOB4Q9Y3A3 225 aa18.88■□□□□ 0.61
CTDSP1-211ENST00000492545 SC5DO75845 299 aa18.87■□□□□ 0.61
CTDSP1-211ENST00000492545 AMY1AP04745 511 aa18.87■□□□□ 0.61
CTDSP1-211ENST00000492545 AMY2AP04746 511 aa18.87■□□□□ 0.61
CTDSP1-211ENST00000492545 IL3RAP26951 378 aa18.87■□□□□ 0.61
CTDSP1-211ENST00000492545 LOXL3P58215 753 aa18.87■□□□□ 0.61
CTDSP1-211ENST00000492545 ZNF816Q0VGE8 651 aaPredicted RBP18.87■□□□□ 0.61
CTDSP1-211ENST00000492545 IRF3Q14653 427 aa18.87■□□□□ 0.61
CTDSP1-211ENST00000492545 MED22Q15528 200 aa18.87■□□□□ 0.61
CTDSP1-211ENST00000492545 SYT6Q5T7P8 510 aaPredicted RBP18.87■□□□□ 0.61
CTDSP1-211ENST00000492545 ZNF554Q86TJ5 538 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms