RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 IZUMO2Q6UXV1 221 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 PRSS48Q7RTY5 328 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 OR8H3Q8N146 312 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 OR5AU1Q8NGC0 362 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 RFESDQ8TAC1 157 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 DERL3Q96Q80 235 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 OR14A2Q96R54 314 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 PPIL3Q9H2H8 161 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 Q9H521 79 aa13.29□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A10PA6NDY2 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A18PA6NE21 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A16PA6NEW6 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A20PA6NIJ5 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A7PA6NKC0 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A12PA8MX19 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A5PA8MXJ8 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A23PA8MXZ1 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 GAPDHP04406 335 aaKnown RBP13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A15PP0C7V4 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A13PP0C7W8 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A14PP0C7W9 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 FAM90A24PP0C7X0 464 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 PF4V1P10720 104 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 VHLP40337 213 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 IRF3Q14653 427 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 ABCA11PQ4W5N1 156 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 C6orf183Q5T699 404 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 RSBN1Q5VWQ0 802 aaPredicted RBP13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 RNF144BQ7Z419 303 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 OR13A1Q8NGR1 328 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 UFD1Q92890 307 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 ARL11Q969Q4 196 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 KCNIP1Q9NZI2 227 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 TRAPPC2LQ9UL33 140 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 MRPS28Q9Y2Q9 187 aaKnown RBP13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 LSM2Q9Y333 95 aaKnown RBP13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 MOB4Q9Y3A3 225 aa13.28□□□□□ -0.28
PDLIM2-217ENST00000491330 TCRBV4S1A1TA0A5B7 111 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 AIPO00170 330 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 GEMIN2O14893 280 aaKnown RBP13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 ORC5O43913 435 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 CA11O75493 328 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 ATP6V1G2O95670 118 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 UBBP0CG47 229 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 CD28P10747 220 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 TMEM11P17152 192 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 CRHBPP24387 322 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 CD24P25063 80 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 MED22Q15528 200 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 LDLRAD2Q5SZI1 272 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 AWAT2Q6E213 333 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 GLIPR1L1Q6UWM5 242 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 UNQ9370/PRO34162Q6UXP9 181 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 REC114Q7Z4M0 266 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 OR52M1Q8NGK5 317 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 WNT10AQ9GZT5 417 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 CST11Q9H112 138 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 LINC00574Q9H8X3 128 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 PSG11Q9UQ72 335 aa13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 TSSC4Q9Y5U2 329 aaPredicted RBP13.27□□□□□ -0.29
PDLIM2-217ENST00000491330 PNMA8CA0A1B0GUJ8 204 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 NPIPB11E5RHQ5 1161 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 SDCBPO00560 298 aaPredicted RBP13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 PF4P02776 101 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 MAS1P04201 325 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 GLAP06280 429 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 CGB3P0DN86 165 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 CGB7P0DN87 165 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 GNG10P50151 68 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 SLC35B1P78383 322 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 MLLT11Q13015 90 aaPredicted RBP13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 TPBGQ13641 420 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 TBCEQ15813 527 aaPredicted RBP13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 KHDC1LQ5JSQ8 128 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 ZFP41Q8N8Y5 198 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 OR13C5Q8NGS8 318 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 MUL1Q969V5 352 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 CITED2Q99967 270 aaPredicted RBP13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 ETAA1Q9NY74 926 aa13.26□□□□□ -0.29
PDLIM2-217ENST00000491330 LY6LH3BQJ8 138 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 CCRL2O00421 344 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 TXNL1O43396 289 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 CRTAPO75718 401 aaPredicted RBP13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 SC5DO75845 299 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 CD33P20138 364 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 GDNFP39905 211 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 Q3ZCU0 254 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 ACSM3Q53FZ2 586 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 GLT8D1Q68CQ7 371 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 BAIAP2L2Q6UXY1 529 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 MOB3BQ86TA1 216 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 C1QL4Q86Z23 238 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 PLPPR1Q8TBJ4 325 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 GON7Q9BXV9 100 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 YTHDF1Q9BYJ9 559 aaKnown RBP13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 GNG12Q9UBI6 72 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 PEX16Q9Y5Y5 336 aa13.25□□□□□ -0.29
PDLIM2-217ENST00000491330 TET2Q6N021 2002 aaPredicted RBP13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 TRAV8-7A0A075B6U6 113 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 A0A1W2PPK0 400 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms