RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 A0A1W2PPI3 338 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 C15orf65H3BRN8 121 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 ZNF780AO75290 641 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-219ENST00000491183 MT-ND4P03905 459 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 GTF2F2P13984 249 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 CELP19835 753 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 GNG10P50151 68 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 TAS2R43P59537 309 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 ATAD3CQ5T2N8 411 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 CENPVQ7Z7K6 275 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-219ENST00000491183 NANOGP1Q8N7R0 232 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 BPIFB6Q8NFQ5 453 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 DERL3Q96Q80 235 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 PCDHB16Q9NRJ7 776 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 FKBP14Q9NWM8 211 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 CKLFQ9UBR5 152 aa14.33□□□□□ -0.12
HMGN1-219ENST00000491183 MRPS28Q9Y2Q9 187 aaKnown RBP14.33□□□□□ -0.12
HMGN1-219ENST00000491183 TMEM30CPA0ZSE6 113 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 MAS1P04201 325 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 CD1AP06126 327 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 SNRNP70P08621 437 aaKnown RBP14.32□□□□□ -0.12
HMGN1-219ENST00000491183 FAM106CPP0CH98 169 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 WNT4P56705 351 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 MADCAM1Q13477 382 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 GPR176Q14439 515 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 KPRPQ5T749 579 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-219ENST00000491183 FAM53AQ6NSI3 398 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-219ENST00000491183 C10orf99Q6UWK7 81 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 GLIPR1L1Q6UWM5 242 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 STX19Q8N4C7 294 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 JAGN1Q8N5M9 183 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 DRAM1Q8N682 238 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 OR56B4Q8NH76 319 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 UBALD1Q8TB05 177 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 CCDC107Q8WV48 283 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 TFAP2CQ92754 450 aa14.32□□□□□ -0.12
HMGN1-219ENST00000491183 PRKDCP78527 4128 aaKnown RBP14.31□□□□□ -0.12
HMGN1-219ENST00000491183 ZNF497Q6ZNH5 498 aa14.31□□□□□ -0.12
HMGN1-219ENST00000491183 CDH26Q8IXH8 852 aa14.31□□□□□ -0.12
HMGN1-219ENST00000491183 OR4F17Q8NGA8 305 aa14.31□□□□□ -0.12
HMGN1-219ENST00000491183 ARL11Q969Q4 196 aa14.31□□□□□ -0.12
HMGN1-219ENST00000491183 CYYR1Q96J86 154 aa14.31□□□□□ -0.12
HMGN1-219ENST00000491183 OR4F4Q96R69 305 aa14.31□□□□□ -0.12
HMGN1-219ENST00000491183 RCC2Q9P258 522 aaKnown RBP14.31□□□□□ -0.12
HMGN1-219ENST00000491183 A0A1W2PRX2 142 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 MYL12BO14950 172 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 RAB7AP51149 207 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 LOXL3P58215 753 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 OXLD1Q5BKU9 147 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 C9orf152Q5JTZ5 239 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 OR8H3Q8N146 312 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 TMEM104Q8NE00 496 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 OR52M1Q8NGK5 317 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 NEK7Q8TDX7 302 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 MRPS24Q96EL2 167 aaKnown RBP14.3□□□□□ -0.12
HMGN1-219ENST00000491183 BANF2Q9H503 90 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 MOB4Q9Y3A3 225 aa14.3□□□□□ -0.12
HMGN1-219ENST00000491183 M0QZK8 103 aa14.29□□□□□ -0.12
HMGN1-219ENST00000491183 SDCBPO00560 298 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-219ENST00000491183 ORC5O43913 435 aa14.29□□□□□ -0.12
HMGN1-219ENST00000491183 VHLP40337 213 aa14.29□□□□□ -0.12
HMGN1-219ENST00000491183 GP2P55259 537 aaKnown RBP14.29□□□□□ -0.12
HMGN1-219ENST00000491183 HNF4GQ14541 408 aa14.29□□□□□ -0.12
HMGN1-219ENST00000491183 INSL4Q14641 139 aa14.29□□□□□ -0.12
HMGN1-219ENST00000491183 AWAT2Q6E213 333 aa14.29□□□□□ -0.12
HMGN1-219ENST00000491183 UNQ9370/PRO34162Q6UXP9 181 aa14.29□□□□□ -0.12
HMGN1-219ENST00000491183 OR10X1Q8NGY0 326 aa14.29□□□□□ -0.12
HMGN1-219ENST00000491183 GFOD1Q9NXC2 390 aa14.29□□□□□ -0.12
HMGN1-219ENST00000491183 NKX1-2Q9UD57 310 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-219ENST00000491183 IGHV3-43A0A0B4J1X8 118 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 TCRBV4S1A1TA0A5B7 111 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 MCRIP1C9JLW8 97 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 AIPO00170 330 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 PRB2P02812 416 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-219ENST00000491183 CDK1P06493 297 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 IGHV3-43DP0DP04 118 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 TMEM11P17152 192 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 ZNF816Q0VGE8 651 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-219ENST00000491183 HES1Q14469 280 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 SIGIRRQ6IA17 410 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 RAB12Q6IQ22 244 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 GAPTQ8N292 157 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 LINC00311Q8N616 119 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 C5orf56Q8N8D9 126 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 OR4K15Q8NH41 348 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 MYDGFQ969H8 173 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 SPACA1Q9HBV2 294 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 ERGIC3Q9Y282 383 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 PEX16Q9Y5Y5 336 aa14.28□□□□□ -0.12
HMGN1-219ENST00000491183 NOTCH3Q9UM47 2321 aa14.27□□□□□ -0.12
HMGN1-219ENST00000491183 IGHV1-3A0A0C4DH29 117 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 C12orf77C9JDV5 145 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 HSD17B6O14756 317 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 IGKV1D-33P01593 117 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 IGKV1-33P01594 117 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 GAPDHP04406 335 aaKnown RBP14.27□□□□□ -0.13
HMGN1-219ENST00000491183 MGMTP16455 207 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 REG1BP48304 166 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 EBI3Q14213 229 aa14.27□□□□□ -0.13
HMGN1-219ENST00000491183 ACSM3Q53FZ2 586 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms