RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 LINC00311Q8N616 119 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 C8orf31Q8N9H6 132 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 PXT1Q8NFP0 134 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 OR5D14Q8NGL3 314 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 KCTD7Q96MP8 289 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 CIB1Q99828 191 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 ZMAT4Q9H898 229 aa16.09■□□□□ 0.17
CLIP2-208ENST00000491075 OR4C45A6NMZ5 311 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 GZMHP20718 246 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 ZNF616Q08AN1 781 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 ATP6AP1Q15904 470 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 ZSCAN26Q16670 478 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 DNAL1Q4LDG9 190 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 SERPINA12Q8IW75 414 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 CCDC197Q8NCU1 140 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 OR52M1Q8NGK5 317 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 UBE2E2Q96LR5 201 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 CHCHD6Q9BRQ6 235 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 ISYNA1Q9NPH2 558 aa16.08■□□□□ 0.16
CLIP2-208ENST00000491075 CHCHD3Q9NX63 227 aaKnown RBP16.08■□□□□ 0.16
CLIP2-208ENST00000491075 TRAV39A0A0B4J263 110 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 DAPL1A0PJW8 107 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 TXNL1O43396 289 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 FRMD6-AS1P0C7T7 363 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 RUNX1Q01196 453 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 PIGYQ3MUY2 71 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 ASPHD1Q5U4P2 390 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 OVCH2Q7RTZ1 564 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 OR1N2Q8NGR9 330 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 ST6GALNAC6Q969X2 333 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 RNFT2Q96EX2 444 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 GABARAPL3Q9BY60 117 aa16.07■□□□□ 0.16
CLIP2-208ENST00000491075 GAR1Q9NY12 217 aaKnown RBP16.07■□□□□ 0.16
CLIP2-208ENST00000491075 I3L521 148 aa16.06■□□□□ 0.16
CLIP2-208ENST00000491075 SDCBPO00560 298 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-208ENST00000491075 GYG2O15488 501 aa16.06■□□□□ 0.16
CLIP2-208ENST00000491075 RPSAP08865 295 aaKnown RBP16.06■□□□□ 0.16
CLIP2-208ENST00000491075 POLR2IP36954 125 aaKnown RBP16.06■□□□□ 0.16
CLIP2-208ENST00000491075 ALKBH1Q13686 389 aaKnown RBP16.06■□□□□ 0.16
CLIP2-208ENST00000491075 LPCAT4Q643R3 524 aa16.06■□□□□ 0.16
CLIP2-208ENST00000491075 TMEM65Q6PI78 240 aa16.06■□□□□ 0.16
CLIP2-208ENST00000491075 PARP16Q8N5Y8 322 aa16.06■□□□□ 0.16
CLIP2-208ENST00000491075 PELI1Q96FA3 418 aa16.06■□□□□ 0.16
CLIP2-208ENST00000491075 CITED4Q96RK1 184 aa16.06■□□□□ 0.16
CLIP2-208ENST00000491075 DPCDQ9BVM2 203 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-208ENST00000491075 VSIG4Q9Y279 399 aa16.06■□□□□ 0.16
CLIP2-208ENST00000491075 TMEM30CPA0ZSE6 113 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 J3QLW9 94 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 J3QRE1 110 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 ZNF19P17023 458 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 RSU1Q15404 277 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 Q3ZCU0 254 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 ZNF491Q8N8L2 437 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 SUMF2Q8NBJ7 301 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 TNFAIP8L1Q8WVP5 186 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 ARL11Q969Q4 196 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 GPER1Q99527 375 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 RIBC2Q9H4K1 309 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 IFT22Q9H7X7 185 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 GNB4Q9HAV0 340 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 GFOD1Q9NXC2 390 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 ZNF107Q9UII5 783 aaPredicted RBP16.05■□□□□ 0.16
CLIP2-208ENST00000491075 CSMD3Q7Z407 3707 aa16.05■□□□□ 0.16
CLIP2-208ENST00000491075 ZNF736B4DX44 427 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-208ENST00000491075 C15orf65H3BRN8 121 aa16.04■□□□□ 0.16
CLIP2-208ENST00000491075 GABRPO00591 440 aa16.04■□□□□ 0.16
CLIP2-208ENST00000491075 OVOL1O14753 267 aa16.04■□□□□ 0.16
CLIP2-208ENST00000491075 ZNF137PP52743 207 aa16.04■□□□□ 0.16
CLIP2-208ENST00000491075 F2RL1P55085 397 aa16.04■□□□□ 0.16
CLIP2-208ENST00000491075 MRPL48Q96GC5 212 aaKnown RBP16.04■□□□□ 0.16
CLIP2-208ENST00000491075 C4orf36Q96KX1 117 aa16.04■□□□□ 0.16
CLIP2-208ENST00000491075 FAM192AQ9GZU8 254 aa16.04■□□□□ 0.16
CLIP2-208ENST00000491075 STARD9Q9P2P6 4700 aa16.04■□□□□ 0.16
CLIP2-208ENST00000491075 MAGEB3O15480 346 aa16.03■□□□□ 0.16
CLIP2-208ENST00000491075 SAP30O75446 220 aa16.03■□□□□ 0.16
CLIP2-208ENST00000491075 GNB1P62873 340 aa16.03■□□□□ 0.16
CLIP2-208ENST00000491075 KIAA0141Q14154 515 aaPredicted RBP16.03■□□□□ 0.16
CLIP2-208ENST00000491075 ACBD7Q8N6N7 88 aa16.03■□□□□ 0.16
CLIP2-208ENST00000491075 OR10K1Q8NGX5 313 aa16.03■□□□□ 0.16
CLIP2-208ENST00000491075 DCUN1D4Q92564 292 aa16.03■□□□□ 0.16
CLIP2-208ENST00000491075 KLK15Q9H2R5 256 aa16.03■□□□□ 0.16
CLIP2-208ENST00000491075 IMPAD1Q9NX62 359 aa16.03■□□□□ 0.16
CLIP2-208ENST00000491075 DHDHQ9UQ10 334 aa16.03■□□□□ 0.16
CLIP2-208ENST00000491075 TMEM212A6NML5 194 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 ORC5O43913 435 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 OR7C1O76099 320 aaPredicted RBP16.02■□□□□ 0.16
CLIP2-208ENST00000491075 HTR3BO95264 441 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 GP9P14770 177 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 SPNP16150 400 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 RAB3AP20336 220 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 FASP25445 335 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 PPIFP30405 207 aaKnown RBP16.02■□□□□ 0.16
CLIP2-208ENST00000491075 NHLRC3Q5JS37 347 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 ZFAND6Q6FIF0 208 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 SATL1Q86VE3 508 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 TSEN15Q8WW01 171 aaKnown RBP16.02■□□□□ 0.16
CLIP2-208ENST00000491075 TRUB1Q8WWH5 349 aaKnown RBP16.02■□□□□ 0.16
CLIP2-208ENST00000491075 MYCBPQ99417 103 aaPredicted RBP16.02■□□□□ 0.16
CLIP2-208ENST00000491075 OR51J1Q9H342 316 aa16.02■□□□□ 0.16
CLIP2-208ENST00000491075 ZNF581Q9P0T4 197 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms