RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 C12orf4Q9NQ89 552 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 CCDC59Q9P031 241 aaKnown RBP12.97□□□□□ -0.33
TRA2A-208ENST00000490942 RSL24D1Q9UHA3 163 aaKnown RBP12.97□□□□□ -0.33
TRA2A-208ENST00000490942 SESN1Q9Y6P5 492 aa12.97□□□□□ -0.33
TRA2A-208ENST00000490942 CENPVL3A0A0U1RRI6 287 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 UBE2QL1A1L167 161 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 APOA1P02647 267 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 GSTP1P09211 210 aaKnown RBP12.96□□□□□ -0.33
TRA2A-208ENST00000490942 FPR2P25090 351 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 CD34P28906 385 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 UBE2E1P51965 193 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 C17orf58Q2M2W7 97 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 MOGAT2Q3SYC2 334 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 Q3ZCU0 254 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 ZNF880Q6PDB4 577 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 RTN4RL2Q86UN3 420 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 OR52M1Q8NGK5 317 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 OR13D1Q8NGV5 346 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 MRPL30Q8TCC3 161 aaKnown RBP12.96□□□□□ -0.33
TRA2A-208ENST00000490942 DYNC2LI1Q8TCX1 351 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 DYRK2Q92630 601 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 S100A16Q96FQ6 103 aaKnown RBP12.96□□□□□ -0.33
TRA2A-208ENST00000490942 DIABLOQ9NR28 239 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 CALYQ9NYX4 217 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 TRAPPC2LQ9UL33 140 aa12.96□□□□□ -0.33
TRA2A-208ENST00000490942 TRAV40A0A0B4J280 105 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 IGHV1-69DA0A0B4J2H0 117 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 TPPPO94811 219 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 IGHV1-69P01742 117 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 GLP1RP43220 463 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 PITPNAQ00169 270 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 SRSF7Q16629 238 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRA2A-208ENST00000490942 PNLIPRP3Q17RR3 467 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 MIDNQ504T8 468 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 SAMD12Q8N8I0 201 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 OR11H6Q8NGC7 330 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 MRGPRDQ8TDS7 321 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 SIRT7Q9NRC8 400 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 KCNIP1Q9NZI2 227 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 AK3Q9UIJ7 227 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 KCNK7Q9Y2U2 307 aa12.95□□□□□ -0.34
TRA2A-208ENST00000490942 ANK3Q12955 4377 aaKnown RBP12.94□□□□□ -0.34
TRA2A-208ENST00000490942 RNASEK-C17orf49H0YIS7 233 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 C15orf65H3BRN8 121 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 F2RL2O00254 374 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 SPINT2O43291 252 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 IGHV4-38-2P0DP08 117 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 HOXB4P17483 251 aaPredicted RBP12.94□□□□□ -0.34
TRA2A-208ENST00000490942 EPHA1P21709 976 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 CDK2P24941 298 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 MRPS15P82914 257 aaKnown RBP12.94□□□□□ -0.34
TRA2A-208ENST00000490942 HACD4Q5VWC8 232 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 HCP5Q6MZN7 132 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 LHX4Q969G2 390 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 CMSS1Q9BQ75 279 aaKnown RBP12.94□□□□□ -0.34
TRA2A-208ENST00000490942 TMEM133Q9H2Q1 129 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 ING3Q9NXR8 418 aa12.94□□□□□ -0.34
TRA2A-208ENST00000490942 A0A075B6Q4 140 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 CCDC160A6NGH7 325 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 C12orf77C9JDV5 145 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 XRCC3O43542 346 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 DIRAS3O95661 229 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 MELTFP08582 738 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 CD3GP09693 182 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 ZNF260Q3ZCT1 412 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 Q6ZS49 121 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 C8orf31Q8N9H6 132 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 OR4K15Q8NH41 348 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 DGCR14Q96DF8 476 aaKnown RBP12.93□□□□□ -0.34
TRA2A-208ENST00000490942 KIRREL1Q96J84 757 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 MS4A7Q9GZW8 240 aaPredicted RBP12.93□□□□□ -0.34
TRA2A-208ENST00000490942 PRDM13Q9H4Q3 707 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 IDI2-AS1Q9NZ38 188 aa12.93□□□□□ -0.34
TRA2A-208ENST00000490942 GNB3P16520 340 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 RCC1P18754 421 aaPredicted RBP12.92□□□□□ -0.34
TRA2A-208ENST00000490942 DTYMKP23919 212 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 SSTR5P35346 364 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 HTD2P86397 168 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 HMGN3Q15651 99 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 CDNFQ49AH0 187 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 LY6G6FQ5SQ64 297 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 ZNF626Q68DY1 528 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 IL17RELQ6ZVW7 336 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 CCDC107Q8WV48 283 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 ARL11Q969Q4 196 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 CREB3L1Q96BA8 519 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 CLEC7AQ9BXN2 247 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 TAF9BQ9HBM6 251 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 CHMP1AQ9HD42 196 aaPredicted RBP12.92□□□□□ -0.34
TRA2A-208ENST00000490942 Q9N2K0 584 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 COMMD3Q9UBI1 195 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 TBL2Q9Y4P3 447 aaKnown RBP12.92□□□□□ -0.34
TRA2A-208ENST00000490942 A3GALT2U3KPV4 340 aa12.92□□□□□ -0.34
TRA2A-208ENST00000490942 A0A0A6YYJ9 748 aa12.91□□□□□ -0.34
TRA2A-208ENST00000490942 IGHV2-26A0A0B4J1V2 119 aa12.91□□□□□ -0.34
TRA2A-208ENST00000490942 ODF3BA8MYP8 253 aa12.91□□□□□ -0.34
TRA2A-208ENST00000490942 NPFFO15130 113 aa12.91□□□□□ -0.34
TRA2A-208ENST00000490942 MNDAP41218 407 aa12.91□□□□□ -0.34
TRA2A-208ENST00000490942 KIR2DS4P43632 304 aa12.91□□□□□ -0.34
TRA2A-208ENST00000490942 ARFRP1Q13795 201 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms