RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	IL3RA	P26951	378 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	ZNF616	Q08AN1	781 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	ASPHD1	Q5U4P2	390 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	ZNF691	Q5VV52	312 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	PXT1	Q8NFP0	134 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	OR8J1	Q8NGP2	316 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	OR1N2	Q8NGR9	330 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	CHCHD6	Q9BRQ6	235 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	GABARAPL1	Q9H0R8	117 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	FAM118A	Q9NWS6	357 aa		11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839	CHCHD3	Q9NX63	227 aa	Known RBP	11.87	□□□□□ -0.51
AGAP3-222	ENST00000490839		G3V2T6	193 aa		11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839		I3L521	148 aa		11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839	SLC16A6	O15403	523 aa		11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839	TXNL1	O43396	289 aa		11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839	ZFAND6	Q6FIF0	208 aa		11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839	OR52M1	Q8NGK5	317 aa		11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839	ST6GALNAC6	Q969X2	333 aa		11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839	EME1	Q96AY2	570 aa		11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839	CPNE2	Q96FN4	548 aa	Predicted RBP	11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839	GNB4	Q9HAV0	340 aa		11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839	VSIG4	Q9Y279	399 aa		11.86	□□□□□ -0.51
AGAP3-222	ENST00000490839	TRAV39	A0A0B4J263	110 aa		11.85	□□□□□ -0.51
AGAP3-222	ENST00000490839	OR4C45	A6NMZ5	311 aa		11.85	□□□□□ -0.51
AGAP3-222	ENST00000490839	GZMH	P20718	246 aa		11.85	□□□□□ -0.51
AGAP3-222	ENST00000490839	ZSCAN26	Q16670	478 aa		11.85	□□□□□ -0.51
AGAP3-222	ENST00000490839	PIGY	Q3MUY2	71 aa		11.85	□□□□□ -0.51
AGAP3-222	ENST00000490839	TMEM65	Q6PI78	240 aa		11.85	□□□□□ -0.51
AGAP3-222	ENST00000490839	ZNF491	Q8N8L2	437 aa		11.85	□□□□□ -0.51
AGAP3-222	ENST00000490839	OR5D14	Q8NGL3	314 aa		11.85	□□□□□ -0.51
AGAP3-222	ENST00000490839	DPCD	Q9BVM2	203 aa	Predicted RBP	11.85	□□□□□ -0.51
AGAP3-222	ENST00000490839	ZNF107	Q9UII5	783 aa	Predicted RBP	11.85	□□□□□ -0.51
AGAP3-222	ENST00000490839	DAPL1	A0PJW8	107 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	TMEM30CP	A0ZSE6	113 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	C15orf65	H3BRN8	121 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	SDCBP	O00560	298 aa	Predicted RBP	11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	OVOL1	O14753	267 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	SAP30	O75446	220 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	GP9	P14770	177 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	SPN	P16150	400 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	GYS2	P54840	703 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	GNB1	P62873	340 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	KIAA0141	Q14154	515 aa	Predicted RBP	11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	ATP6AP1	Q15904	470 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839		Q3ZCU0	254 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	ZDHHC13	Q8IUH4	622 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	SERPINA12	Q8IW75	414 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	PARP16	Q8N5Y8	322 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	SUMF2	Q8NBJ7	301 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	TNFAIP8L1	Q8WVP5	186 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	DCUN1D4	Q92564	292 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	ISOC1	Q96CN7	298 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	CIB1	Q99828	191 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	KLK15	Q9H2R5	256 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	GFOD1	Q9NXC2	390 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	POMP	Q9Y244	141 aa		11.84	□□□□□ -0.51
AGAP3-222	ENST00000490839	ZNF736	B4DX44	427 aa	Predicted RBP	11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	GABRP	O00591	440 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	ATP8B1	O43520	1251 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	IGLV1-40	P01703	118 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	RPSA	P08865	295 aa	Known RBP	11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	PPIF	P30405	207 aa	Known RBP	11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	ZNF137P	P52743	207 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	F2RL1	P55085	397 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	GABPB1	Q06547	395 aa	Predicted RBP	11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	ALKBH1	Q13686	389 aa	Known RBP	11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	RSU1	Q15404	277 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	DNAL1	Q4LDG9	190 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	LPCAT4	Q643R3	524 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	OR6Q1	Q8NGQ2	317 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	ARL11	Q969Q4	196 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	PELI1	Q96FA3	418 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	OR5B12	Q96R08	314 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	GPER1	Q99527	375 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	TM2D3	Q9BRN9	247 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	GABARAPL3	Q9BY60	117 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	OR51J1	Q9H342	316 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	IFT22	Q9H7X7	185 aa		11.83	□□□□□ -0.52
AGAP3-222	ENST00000490839	TRIM64C	A6NLI5	447 aa		11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839		J3QRE1	110 aa		11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839	ORC5	O43913	435 aa		11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839	SLC2A2	P11168	524 aa	Predicted RBP	11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839	POLR2I	P36954	125 aa	Known RBP	11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839	GALE	Q14376	348 aa		11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839	CCDC197	Q8NCU1	140 aa		11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839	OR10K1	Q8NGX5	313 aa		11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839	FAM192A	Q9GZU8	254 aa		11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839	RIBC2	Q9H4K1	309 aa		11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839	EDA2R	Q9HAV5	297 aa		11.82	□□□□□ -0.52
AGAP3-222	ENST00000490839	IGHV3-43	A0A0B4J1X8	118 aa		11.81	□□□□□ -0.52
AGAP3-222	ENST00000490839	FAM90A10P	A6NDY2	464 aa		11.81	□□□□□ -0.52
AGAP3-222	ENST00000490839		J3QLW9	94 aa		11.81	□□□□□ -0.52
AGAP3-222	ENST00000490839	LDLRAD4	O15165	306 aa		11.81	□□□□□ -0.52
AGAP3-222	ENST00000490839	MAGEB3	O15480	346 aa		11.81	□□□□□ -0.52
AGAP3-222	ENST00000490839	GYG2	O15488	501 aa		11.81	□□□□□ -0.52
AGAP3-222	ENST00000490839	OR7C1	O76099	320 aa	Predicted RBP	11.81	□□□□□ -0.52
AGAP3-222	ENST00000490839	IGHV3-43D	P0DP04	118 aa		11.81	□□□□□ -0.52
AGAP3-222	ENST00000490839	ZNF19	P17023	458 aa		11.81	□□□□□ -0.52
AGAP3-222	ENST00000490839	RAB3A	P20336	220 aa		11.81	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms