RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 OR5H14A6NHG9 310 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 LRRC30A6NM36 301 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 F8VVB4 439 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 F8VWA3 439 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 SIRPB1O00241 398 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 SLC33A1O00400 549 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-210ENST00000490808 B3GALNT1O75752 331 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 IFNA21P01568 189 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 ADH4P08319 380 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 CXCL3P19876 107 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 SRPXP78539 464 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 HLA-DRB3P79483 266 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 BSPH1Q075Z2 132 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 TESK1Q15569 626 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 NCMAPQ5T1S8 102 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 AADACL3Q5VUY0 350 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 ADAM5Q6NVV9 412 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 RTN4RL2Q86UN3 420 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 CMTM1Q8IZ96 169 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 C1orf87Q8N0U7 546 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 OR5D13Q8NGL4 314 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 MRPL30Q8TCC3 161 aaKnown RBP8.65□□□□□ -1.02
HDAC3-210ENST00000490808 CASTOR1Q8WTX7 329 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 LRRC29Q8WV35 223 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 MOB3AQ96BX8 217 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 OR2V2Q96R30 315 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 SUCNR1Q9BXA5 334 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 GON7Q9BXV9 100 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 TMPRSS13Q9BYE2 586 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 MRPL37Q9BZE1 423 aaKnown RBP8.65□□□□□ -1.02
HDAC3-210ENST00000490808 CHIAQ9BZP6 476 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 MS4A5Q9H3V2 200 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 RAB18Q9NP72 206 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 RNF7Q9UBF6 113 aa8.65□□□□□ -1.02
HDAC3-210ENST00000490808 CSMD2Q7Z408 3487 aa8.65□□□□□ -1.03
HDAC3-210ENST00000490808 DPRXA6NFQ7 191 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 OOEPA6NGQ2 149 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 SRRM5B3KS81 715 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 HSPB6O14558 160 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 BET1O15155 118 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 SPRY3O43610 288 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 PPYP01298 95 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 THBDP07204 575 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 PET100P0DJ07 73 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 APOBEC3AP31941 199 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-210ENST00000490808 PRAMEF6Q5VXH4 476 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 ZNF660Q6AZW8 331 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-210ENST00000490808 ZNF880Q6PDB4 577 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 ZNF497Q6ZNH5 498 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 LRP11Q86VZ4 500 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 C11orf53Q8IXP5 236 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 ZNF295-AS1Q8N0V1 137 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 ADAD2Q8NCV1 583 aaKnown RBP8.64□□□□□ -1.03
HDAC3-210ENST00000490808 OR5M8Q8NGP6 311 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 NINJ1Q92982 152 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 TOMM40LQ969M1 308 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 RTBDNQ9BSG5 229 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-210ENST00000490808 TMEM204Q9BSN7 226 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 C5orf66Q9H5L9 145 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 METTL8Q9H825 291 aaKnown RBP8.64□□□□□ -1.03
HDAC3-210ENST00000490808 ZFP57Q9NU63 452 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 OPN4Q9UHM6 478 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 RNF115Q9Y4L5 304 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 WIPI2Q9Y4P8 454 aa8.64□□□□□ -1.03
HDAC3-210ENST00000490808 F8P00451 2351 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 IGKV1D-8A0A087WSZ0 117 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-210ENST00000490808 C5orf51A6NDU8 294 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 CRYM-AS1A6NIL9 109 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 ZSCAN5BA6NJL1 495 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 HMSDA8MTL9 139 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 DEFB108AA8MXU0 73 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 NPIPB11E5RHQ5 1161 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 M0R233 179 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 HSPA12AO43301 675 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 CD55P08174 381 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 OR4A8P0C604 315 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 MUC1P15941 1255 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-210ENST00000490808 GZMHP20718 246 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 NFYAP23511 347 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-210ENST00000490808 PRDX2P32119 198 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 SERPINF1P36955 418 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 NKX2-5P52952 324 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-210ENST00000490808 PIGPP57054 158 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 FXYD4P59646 89 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 PAX5Q02548 391 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 SRSF4Q08170 494 aaKnown RBP8.63□□□□□ -1.03
HDAC3-210ENST00000490808 NDUFA5Q16718 116 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 C17orf107Q6ZR85 190 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 KCTD9Q7L273 389 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 GAPTQ8N292 157 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 ASCC1Q8N9N2 400 aaKnown RBP8.63□□□□□ -1.03
HDAC3-210ENST00000490808 GRPEL2Q8TAA5 225 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 THAP6Q8TBB0 222 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 Q8TCH9 128 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 FAM216AQ8WUB2 273 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 ITLN1Q8WWA0 313 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 DYRK2Q92630 601 aa8.63□□□□□ -1.03
HDAC3-210ENST00000490808 MRGPRFQ96AM1 343 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms