RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 AQP4P55087 323 aa25.05■■□□□ 1.6
LDB1-204ENST00000490751 MADCAM1Q13477 382 aa25.05■■□□□ 1.6
LDB1-204ENST00000490751 NSUN5P1Q3KNT7 163 aa25.05■■□□□ 1.6
LDB1-204ENST00000490751 SLC16A12Q6ZSM3 486 aa25.05■■□□□ 1.6
LDB1-204ENST00000490751 NKAIN3Q8N8D7 197 aa25.05■■□□□ 1.6
LDB1-204ENST00000490751 CCDC107Q8WV48 283 aa25.05■■□□□ 1.6
LDB1-204ENST00000490751 NRG4Q8WWG1 115 aa25.05■■□□□ 1.6
LDB1-204ENST00000490751 SPACA1Q9HBV2 294 aa25.05■■□□□ 1.6
LDB1-204ENST00000490751 RCC2Q9P258 522 aaKnown RBP25.05■■□□□ 1.6
LDB1-204ENST00000490751 ABCA11PQ4W5N1 156 aa25.04■■□□□ 1.6
LDB1-204ENST00000490751 RNLSQ5VYX0 342 aa25.04■■□□□ 1.6
LDB1-204ENST00000490751 ZNF497Q6ZNH5 498 aa25.04■■□□□ 1.6
LDB1-204ENST00000490751 UBALD1Q8TB05 177 aa25.04■■□□□ 1.6
LDB1-204ENST00000490751 CITED2Q99967 270 aaPredicted RBP25.04■■□□□ 1.6
LDB1-204ENST00000490751 BANF2Q9H503 90 aa25.04■■□□□ 1.6
LDB1-204ENST00000490751 A0A1W2PPE3 182 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 C15orf65H3BRN8 121 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 AIPO00170 330 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 MT-ND4P03905 459 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 OPN1MWP04001 364 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 OPN1MW2P0DN77 364 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 OPN1MW3P0DN78 364 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 DIAPH2-AS1Q14236 149 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 INSL4Q14641 139 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 C1QL4Q86Z23 238 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 OR56B4Q8NH76 319 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 MYDGFQ969H8 173 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 ARL11Q969Q4 196 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 SCN3BQ9NY72 215 aa25.03■■□□□ 1.6
LDB1-204ENST00000490751 A0A1W2PPI3 338 aa25.02■■□□□ 1.6
LDB1-204ENST00000490751 MCRIP1C9JLW8 97 aa25.02■■□□□ 1.6
LDB1-204ENST00000490751 FAM106CPP0CH98 169 aa25.02■■□□□ 1.6
LDB1-204ENST00000490751 MGMTP16455 207 aa25.02■■□□□ 1.6
LDB1-204ENST00000490751 GABPB1Q06547 395 aaPredicted RBP25.02■■□□□ 1.6
LDB1-204ENST00000490751 NDUFA11Q86Y39 141 aa25.02■■□□□ 1.6
LDB1-204ENST00000490751 TMEM104Q8NE00 496 aa25.02■■□□□ 1.6
LDB1-204ENST00000490751 OR10X1Q8NGY0 326 aa25.02■■□□□ 1.6
LDB1-204ENST00000490751 SGCDQ92629 289 aa25.02■■□□□ 1.6
LDB1-204ENST00000490751 SELENOIQ9C0D9 397 aa25.02■■□□□ 1.6
LDB1-204ENST00000490751 FAM90A18PA6NE21 464 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A16PA6NEW6 464 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A20PA6NIJ5 464 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 SH2D7A6NKC9 451 aaPredicted RBP25.01■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A9PA6NNJ1 464 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A12PA8MX19 464 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A5PA8MXJ8 464 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 CRTAPO75718 401 aaPredicted RBP25.01■■□□□ 1.59
LDB1-204ENST00000490751 AMY1AP04745 511 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 AMY2AP04746 511 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 LPLP06858 475 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 SNRNP70P08621 437 aaKnown RBP25.01■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A15PP0C7V4 464 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A13PP0C7W8 464 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A14PP0C7W9 464 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A24PP0C7X0 464 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 ACSM3Q53FZ2 586 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 RAB12Q6IQ22 244 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 DRAM1Q8N682 238 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 UQCC2Q9BRT2 126 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 TMED9Q9BVK6 235 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 ETAA1Q9NY74 926 aa25.01■■□□□ 1.59
LDB1-204ENST00000490751 LSM2Q9Y333 95 aaKnown RBP25.01■■□□□ 1.59
LDB1-204ENST00000490751 SDCBPO00560 298 aaPredicted RBP25■■□□□ 1.59
LDB1-204ENST00000490751 ORC5O43913 435 aa25■■□□□ 1.59
LDB1-204ENST00000490751 RAB7AP51149 207 aa25■■□□□ 1.59
LDB1-204ENST00000490751 EMX1Q04741 257 aaPredicted RBP25■■□□□ 1.59
LDB1-204ENST00000490751 SPHARQ15513 63 aa25■■□□□ 1.59
LDB1-204ENST00000490751 FAM27D1Q5T7N8 215 aa25■■□□□ 1.59
LDB1-204ENST00000490751 UNQ9370/PRO34162Q6UXP9 181 aa25■■□□□ 1.59
LDB1-204ENST00000490751 THNSL2Q86YJ6 484 aa25■■□□□ 1.59
LDB1-204ENST00000490751 MS4A15Q8N5U1 240 aa25■■□□□ 1.59
LDB1-204ENST00000490751 OR52M1Q8NGK5 317 aa25■■□□□ 1.59
LDB1-204ENST00000490751 PEX16Q9Y5Y5 336 aa25■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A10PA6NDY2 464 aa24.99■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A7PA6NKC0 464 aa24.99■■□□□ 1.59
LDB1-204ENST00000490751 ADARB2-AS1A8MUL3 147 aa24.99■■□□□ 1.59
LDB1-204ENST00000490751 FAM90A23PA8MXZ1 464 aa24.99■■□□□ 1.59
LDB1-204ENST00000490751 MED22Q15528 200 aa24.99■■□□□ 1.59
LDB1-204ENST00000490751 OR8H3Q8N146 312 aa24.99■■□□□ 1.59
LDB1-204ENST00000490751 OR5AU1Q8NGC0 362 aa24.99■■□□□ 1.59
LDB1-204ENST00000490751 Q96M66 194 aa24.99■■□□□ 1.59
LDB1-204ENST00000490751 GFOD1Q9NXC2 390 aa24.99■■□□□ 1.59
LDB1-204ENST00000490751 MOB4Q9Y3A3 225 aa24.99■■□□□ 1.59
LDB1-204ENST00000490751 M0QZK8 103 aa24.98■■□□□ 1.59
LDB1-204ENST00000490751 VHLP40337 213 aa24.98■■□□□ 1.59
LDB1-204ENST00000490751 GP2P55259 537 aaKnown RBP24.98■■□□□ 1.59
LDB1-204ENST00000490751 GPR50Q13585 617 aa24.98■■□□□ 1.59
LDB1-204ENST00000490751 SYT6Q5T7P8 510 aaPredicted RBP24.98■■□□□ 1.59
LDB1-204ENST00000490751 FAM53AQ6NSI3 398 aaPredicted RBP24.98■■□□□ 1.59
LDB1-204ENST00000490751 OR4K15Q8NH41 348 aa24.98■■□□□ 1.59
LDB1-204ENST00000490751 FAM46BQ96A09 425 aa24.98■■□□□ 1.59
LDB1-204ENST00000490751 R3HDM4Q96D70 268 aa24.98■■□□□ 1.59
LDB1-204ENST00000490751 TRAPPC2LQ9UL33 140 aa24.98■■□□□ 1.59
LDB1-204ENST00000490751 PLXNB1O43157 2135 aa24.98■■□□□ 1.59
LDB1-204ENST00000490751 IGHV3-43A0A0B4J1X8 118 aa24.97■■□□□ 1.59
LDB1-204ENST00000490751 HSD17B6O14756 317 aa24.97■■□□□ 1.59
LDB1-204ENST00000490751 IGHV3-43DP0DP04 118 aa24.97■■□□□ 1.59
LDB1-204ENST00000490751 LOXL3P58215 753 aa24.97■■□□□ 1.59
LDB1-204ENST00000490751 SLC35A2P78381 396 aa24.97■■□□□ 1.59
LDB1-204ENST00000490751 HES1Q14469 280 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms