RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 IDH3GP51553 393 aaPredicted RBP12.71□□□□□ -0.37
COL9A1-208ENST00000489611 ZNF497Q6ZNH5 498 aa12.71□□□□□ -0.37
COL9A1-208ENST00000489611 SCCPDHQ8NBX0 429 aa12.71□□□□□ -0.37
COL9A1-208ENST00000489611 RDH5Q92781 318 aa12.71□□□□□ -0.37
COL9A1-208ENST00000489611 OR2J1Q9GZK6 312 aa12.71□□□□□ -0.37
COL9A1-208ENST00000489611 PLSCR4Q9NRQ2 329 aa12.71□□□□□ -0.37
COL9A1-208ENST00000489611 LUZP4Q9P127 313 aa12.71□□□□□ -0.37
COL9A1-208ENST00000489611 IGKV1-6A0A0C4DH72 117 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 HSPB6O14558 160 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 ABCD4O14678 606 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 CEACAM4O75871 244 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 SPP1P10451 314 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 PMP22Q01453 160 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 BAXQ07812 192 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 MZT1Q08AG7 82 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 NMSQ5H8A3 153 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 ZNF324BQ6AW86 544 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-208ENST00000489611 BTNL8Q6UX41 500 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 OR2C3Q8N628 320 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 FAM169BQ8N8A8 192 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 DMBX1Q8NFW5 382 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 OR1J1Q8NGS3 322 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 USB1Q9BQ65 265 aaKnown RBP12.7□□□□□ -0.38
COL9A1-208ENST00000489611 BCL2L14Q9BZR8 327 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 PLEKHF2Q9H8W4 249 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 UQCC1Q9NVA1 299 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-208ENST00000489611 TSPAN4O14817 238 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 PGLYRP1O75594 196 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-208ENST00000489611 SNAPINO95295 136 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 CD200P41217 278 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 P2RY6Q15077 328 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 OR8G1Q15617 311 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 EIF2S3LQ2VIR3 472 aaKnown RBP12.7□□□□□ -0.38
COL9A1-208ENST00000489611 SPATA46Q5T0L3 261 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 SLC25A40Q8TBP6 338 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 OR51B6Q9H340 312 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 HRH4Q9H3N8 390 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 TREM1Q9NP99 234 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 MBNL3Q9NUK0 354 aaKnown RBP12.7□□□□□ -0.38
COL9A1-208ENST00000489611 TAAR3PQ9P1P4 343 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 RCL1Q9Y2P8 373 aaKnown RBP12.7□□□□□ -0.38
COL9A1-208ENST00000489611 MSRB2Q9Y3D2 182 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 WIPI2Q9Y4P8 454 aa12.7□□□□□ -0.38
COL9A1-208ENST00000489611 IGKV1D-13A0A0B4J2D9 117 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 A0A1B0GU03 582 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 NKX2-6A6NCS4 301 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 F8W036 122 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 TRIM77I1YAP6 450 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 RHBDL1O75783 438 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 LYZL6O75951 148 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 NXPH2O95156 264 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 DANCRP0C864 163 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 IGKV1-13P0DP09 117 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 RCC1P18754 421 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-208ENST00000489611 VAMP2P63027 116 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 ID3Q02535 119 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 ZNF154Q13106 437 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 HMGN3Q15651 99 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 OR8G5Q8NG78 346 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 OR10V1Q8NGI7 309 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 ZNF488Q96MN9 340 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 C11orf1Q9H5F2 150 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 CCL28Q9NRJ3 127 aa12.69□□□□□ -0.38
COL9A1-208ENST00000489611 LYRM2Q9NU23 88 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-208ENST00000489611 SLC33A1O00400 549 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-208ENST00000489611 FBXO24O75426 580 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 OR2H2O95918 312 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 GLI4P10075 376 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 LMO1P25800 156 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 KIR2DL2P43627 348 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-208ENST00000489611 LPAR6P43657 344 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 DVL1P1P54792 670 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-208ENST00000489611 C20orf204Q6ZNR8 217 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 FAM219AQ8IW50 185 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 GCNT2Q8N0V5 402 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 ZADH2Q8N4Q0 377 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 CNEP1R1Q8N9A8 125 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 KLF14Q8TD94 323 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-208ENST00000489611 ERGIC1Q969X5 290 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 MS4A7Q9GZW8 240 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-208ENST00000489611 HES4Q9HCC6 221 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 COQ3Q9NZJ6 369 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 RNF212BA8MTL3 300 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 UMAD1C9J7I0 102 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 HSD17B6O14756 317 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 HSPA12AO43301 675 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 PITX3O75364 302 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 SERPINE2P07093 398 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 CELA3BP08861 270 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 KITLGP21583 273 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 EWSR1Q01844 656 aaKnown RBP eCLIP12.68□□□□□ -0.38
COL9A1-208ENST00000489611 PSG7Q13046 419 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 IGFL3Q6UXB1 125 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 WDR86Q86TI4 376 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 LSM10Q969L4 123 aaKnown RBP12.68□□□□□ -0.38
COL9A1-208ENST00000489611 CXXC4Q9H2H0 198 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 ERRFI1Q9UJM3 462 aaPredicted RBP12.68□□□□□ -0.38
COL9A1-208ENST00000489611 TRAPPC2LQ9UL33 140 aa12.68□□□□□ -0.38
COL9A1-208ENST00000489611 CACNA1GO43497 2377 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 322 ms