RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ATPAF1Q5TC12 328 aaPredicted RBP8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 METTL11BQ5VVY1 283 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 RSBN1Q5VWQ0 802 aaPredicted RBP8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DUX4L9Q6RFH8 374 aaPredicted RBP8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 BTN2A1Q7KYR7 527 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DTX3Q8N9I9 347 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DRAXINQ8NBI3 349 aaPredicted RBP8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 ST8SIA4Q92187 359 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DMRTB1Q96MA1 342 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 ABHD1Q96SE0 405 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 S100A13Q99584 98 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 CCL13Q99616 98 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 NEURL2Q9BR09 285 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 PCGF1Q9BSM1 259 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 SCPEP1Q9HB40 452 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 NLKQ9UBE8 527 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DNAJB11Q9UBS4 358 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 DUX4Q9UBX2 424 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 ZNF107Q9UII5 783 aaPredicted RBP8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 NUBP2Q9Y5Y2 271 aa8.7□□□□□ -1.02
SCAMP4-208ENST00000489554 TRAV24A0A0B4J272 114 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 LINC00854A0A1B0GVQ3 168 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 MEIOCA2RUB1 952 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A10PA6NDY2 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A18PA6NE21 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A16PA6NEW6 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 HMX3A6NHT5 357 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A20PA6NIJ5 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 NKX6-3A6NJ46 265 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A8PA6NJQ4 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A7PA6NKC0 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 OR2AT4A6NND4 320 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A22PA8MWA6 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A12PA8MX19 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A5PA8MXJ8 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A23PA8MXZ1 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 MFNGO00587 321 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 NDUFB3O43676 98 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 ZNF737O75373 536 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 OR2H2O95918 312 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 CSTBP04080 98 aaKnown RBP8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 CHRM2P08172 466 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 CSF1P09603 554 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A15PP0C7V4 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A13PP0C7W8 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A14PP0C7W9 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM90A24PP0C7X0 464 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 MMP9P14780 707 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 LMO1P25800 156 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 SLC6A1P30531 599 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 VEGFCP49767 419 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 ACTBP60709 375 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 SMIM21Q3B7S5 101 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 LRRC10Q5BKY1 277 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 SPIN3Q5JUX0 258 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 Q6ZPA2 131 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 IZUMO1Q8IYV9 350 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 OR5T2Q8NGG2 359 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 OR10R2Q8NGX6 335 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 TRIM63Q969Q1 353 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 MED30Q96HR3 178 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 ZNF48Q96MX3 618 aaPredicted RBP8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 GAFA1Q96PS6 74 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 MARVELD1Q9BSK0 173 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 ATG5Q9H1Y0 275 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 PCDHB16Q9NRJ7 776 aa8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 RPUSD1Q9UJJ7 312 aaKnown RBP8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 ELF5Q9UKW6 265 aaPredicted RBP8.69□□□□□ -1.02
SCAMP4-208ENST00000489554 TMEM82A0PJX8 343 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 RFPL4AA6NLU0 287 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 RFPL4AL1F8VTS6 287 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 INMT-MINDY4F8WBC2 141 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 SLC33A1O00400 549 aaPredicted RBP8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 PSPNO60542 156 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 PRAF2O60831 178 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 HAND1O96004 215 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 RNASE1P07998 156 aaKnown RBP8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 PTHLHP12272 177 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 SELLP14151 372 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 GABRR1P24046 479 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 PRSS3P35030 304 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 TAS2R20P59543 309 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 IL13RA1P78552 427 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 MADCAM1Q13477 382 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 MPV17LQ2QL34 196 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 ZNF260Q3ZCT1 412 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 OLFML2AQ68BL7 652 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 BRD3OSQ6XYD6 125 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 ZNF788Q6ZQV5 615 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 C17orf107Q6ZR85 190 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 LINC00596Q86U02 117 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 FAM216BQ8N7L0 139 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 C3orf56Q8N813 242 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 SDSLQ96GA7 329 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 ARHGAP5-AS1Q96IT6 56 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 TBX15Q96SF7 602 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 SULT4A1Q9BR01 284 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 URM1Q9BTM9 101 aaKnown RBP8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 PECRQ9BY49 303 aa8.68□□□□□ -1.02
SCAMP4-208ENST00000489554 SIRPDQ9H106 197 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms