RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 RNF7Q9UBF6 113 aa6.48□□□□□ -1.37
SMC6-209ENST00000489535 EDARQ9UNE0 448 aa6.48□□□□□ -1.37
SMC6-209ENST00000489535 PPP1R3CQ9UQK1 317 aa6.48□□□□□ -1.37
SMC6-209ENST00000489535 WIPI2Q9Y4P8 454 aa6.48□□□□□ -1.37
SMC6-209ENST00000489535 HRNRQ86YZ3 2850 aaPredicted RBP6.47□□□□□ -1.37
SMC6-209ENST00000489535 SMG1Q96Q15 3661 aaKnown RBP6.47□□□□□ -1.37
SMC6-209ENST00000489535 IGHV3OR15-7A0A075B7D8 119 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 RFPL4AA6NLU0 287 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 RFPL4AL1F8VTS6 287 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.47□□□□□ -1.37
SMC6-209ENST00000489535 PYCARD-AS1I3L0S3 204 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 SDCBPO00560 298 aaPredicted RBP6.47□□□□□ -1.37
SMC6-209ENST00000489535 NUDT3O95989 172 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 NAPSAO96009 420 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 CYB5R3P00387 301 aaPredicted RBP6.47□□□□□ -1.37
SMC6-209ENST00000489535 LHBP01229 141 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 RLN1P04808 185 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 PSG2P11465 335 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 IRF2P14316 349 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 GABRA2P47869 451 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 RAG2P55895 527 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 SNRPD2P62316 118 aaKnown RBP6.47□□□□□ -1.37
SMC6-209ENST00000489535 ATXN7L3Q14CW9 347 aaPredicted RBP6.47□□□□□ -1.37
SMC6-209ENST00000489535 MST1LQ2TV78 715 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 FAM209AQ5JX71 171 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 VAX1Q5SQQ9 334 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 SHEQ5VZ18 495 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 KRTAP5-11Q6L8G4 156 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 TMEM17Q86X19 198 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 FAM90A1Q86YD7 464 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 MUC15Q8N387 334 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 ARRDC1Q8N5I2 433 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 CD177Q8N6Q3 437 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 OR5T2Q8NGG2 359 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 OR13C8Q8NGS7 320 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 MRPL30Q8TCC3 161 aaKnown RBP6.47□□□□□ -1.37
SMC6-209ENST00000489535 FAM222BQ8WU58 562 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 MS4A5Q9H3V2 200 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 SAP30LQ9HAJ7 183 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 Q9N2K0 584 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 NECAP2Q9NVZ3 263 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 ING3Q9NXR8 418 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 SLC2A8Q9NY64 477 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 ANXA10Q9UJ72 324 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 NPTNQ9Y639 398 aa6.47□□□□□ -1.37
SMC6-209ENST00000489535 ANKHD1Q8IWZ3 2542 aaKnown RBP6.46□□□□□ -1.37
SMC6-209ENST00000489535 IGKV1D-17A0A075B6S4 117 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 TRBV6-6A0A0A6YYG2 114 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 OR2AT4A6NND4 320 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 IFNL4K9M1U5 179 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 PRAF2O60831 178 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 PEX14O75381 377 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 GSTT2P0CG29 244 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 ANXA7P20073 488 aaKnown RBP6.46□□□□□ -1.38
SMC6-209ENST00000489535 HLA-DRB3P79483 266 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 CBX3Q13185 183 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 GRK1Q15835 563 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 FAM201AQ5SY85 155 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 MEX3BQ6ZN04 569 aaKnown RBP6.46□□□□□ -1.38
SMC6-209ENST00000489535 OVCH2Q7RTZ1 564 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 C5orf24Q7Z6I8 188 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 TGIF2LYQ8IUE0 185 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 ADGRG4Q8IZF6 3080 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 ASCC1Q8N9N2 400 aaKnown RBP6.46□□□□□ -1.38
SMC6-209ENST00000489535 CHAC2Q8WUX2 184 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 CCDC107Q8WV48 283 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 VRK1Q99986 396 aaPredicted RBP6.46□□□□□ -1.38
SMC6-209ENST00000489535 SLC25A21Q9BQT8 299 aaPredicted RBP6.46□□□□□ -1.38
SMC6-209ENST00000489535 ZNF2Q9BSG1 426 aaPredicted RBP6.46□□□□□ -1.38
SMC6-209ENST00000489535 RIMS4Q9H426 269 aaPredicted RBP6.46□□□□□ -1.38
SMC6-209ENST00000489535 TMEM165Q9HC07 324 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 DCAF16Q9NXF7 216 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 LRBAP50851 2863 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 ABCA4P78363 2273 aa6.46□□□□□ -1.38
SMC6-209ENST00000489535 A0A0A6YYJ9 748 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 TRAV39A0A0B4J263 110 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 TMEM30CPA0ZSE6 113 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 C7orf66A4D0T2 115 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 HMX3A6NHT5 357 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 LRRC30A6NM36 301 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 TRDCB7Z8K6 153 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 H7C1Q1 480 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 OR5H8P0DN80 308 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 VSIG10L2P0DP72 767 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 IGFBP2P18065 325 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 PRDX2P32119 198 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 GLP1RP43220 463 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 OR3A1P47881 315 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 KCNJ3P48549 501 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 PPOXP50336 477 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 NPY4RP50391 375 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 MECP2P51608 486 aaKnown RBP6.45□□□□□ -1.38
SMC6-209ENST00000489535 RRAS2P62070 204 aaPredicted RBP6.45□□□□□ -1.38
SMC6-209ENST00000489535 SRSF7Q16629 238 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMC6-209ENST00000489535 ATPAF1Q5TC12 328 aaPredicted RBP6.45□□□□□ -1.38
SMC6-209ENST00000489535 METTL11BQ5VVY1 283 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 STUMQ69YW2 141 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 SLC35E4Q6ICL7 350 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 ZNF880Q6PDB4 577 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 GLDNQ6ZMI3 551 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms