RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 B4DEV8 164 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 HOXC8P31273 242 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 IGHV3-21A0A0B4J1V1 117 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 C7orf66A4D0T2 115 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 MS4A18H0YCH9 400 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 P01737 135 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 SMIM6P0DI80 62 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 GGTLC2Q14390 218 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 MS4A18Q3C1V0 323 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 WDR74Q6RFH5 385 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-209ENST00000489180 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 ZNF788Q6ZQV5 615 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 FAM117AQ9C073 453 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 ARID1AO14497 2285 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 PCM1Q15154 2024 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 A0A1W2PPC1 479 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 WNT5AP41221 380 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 OR5AU1Q8NGC0 362 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 COA4Q9NYJ1 87 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 KCNK7Q9Y2U2 307 aa15.39■□□□□ 0.05
NPHP4-209ENST00000489180 LOC102724200A0A096LPH7 203 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-209ENST00000489180 MUC1P15941 1255 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-209ENST00000489180 ZNF345Q14585 488 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 TMEM65Q6PI78 240 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 TIPARPQ7Z3E1 657 aaKnown RBP15.38■□□□□ 0.05
NPHP4-209ENST00000489180 ELOVL1Q9BW60 279 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 MESP2Q0VG99 397 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 C16orf82Q7Z2V1 217 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 LRRC75AQ8NAA5 344 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 SLC25A40Q8TBP6 338 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 MRPL30Q8TCC3 161 aaKnown RBP15.38■□□□□ 0.05
NPHP4-209ENST00000489180 ADTRPQ96IZ2 230 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 AMMECR1Q9Y4X0 333 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-209ENST00000489180 IGHV5-10-1A0A0J9YXX1 117 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 KIR2DL1P43626 348 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-209ENST00000489180 MRGPRGQ86SM5 289 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 A0A1W2PP11 408 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 SNURFLB1AK76 121 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 SNRPCP09234 159 aaKnown RBP15.38■□□□□ 0.05
NPHP4-209ENST00000489180 MMP9P14780 707 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 MMP16P51512 607 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 TCTAP57738 103 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 C19orf57Q0VDD7 668 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 C1orf210Q8IVY1 113 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 OR2D3Q8NGH3 330 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 DPF1Q92782 380 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 WNT2BQ93097 391 aa15.38■□□□□ 0.05
NPHP4-209ENST00000489180 HELTA6NFD8 242 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 OR4A8P0C604 315 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 TMEM116Q8NCL8 245 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 OR4X1Q8NH49 305 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 ANGPTL4Q9BY76 406 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 F5P12259 2224 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 IGKV1-8A0A0C4DH67 115 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 HLA-DQB1P01920 261 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 IL9P15248 144 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 CD40P25942 277 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 ZNF137PP52743 207 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 FDX2Q6P4F2 183 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 WDR31Q8NA23 367 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 OR52L2PQ8NGH6 319 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 PAM16Q9Y3D7 125 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 ZNF716A6NP11 495 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 CDS2O95674 445 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 PPP1CCP36873 323 aaKnown RBP15.37■□□□□ 0.05
NPHP4-209ENST00000489180 VN1R17PQ8TDU5 208 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 LRRC3BQ96PB8 259 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 TMEM140Q9NV12 185 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 DLEC1Q9Y238 1755 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 DNASE2O00115 360 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-209ENST00000489180 PGLYRP3Q96LB9 341 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 RNF122Q9H9V4 155 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 SIRT7Q9NRC8 400 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.37■□□□□ 0.05
NPHP4-209ENST00000489180 SCN3AQ9NY46 2000 aa15.37■□□□□ 0.05
NPHP4-209ENST00000489180 TRAV38-1A0A0B4J264 116 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 A0A1B0GU03 582 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 J3QT63 122 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 SEC11BP0C7V7 166 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 LIFP15018 202 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 ACP1P24666 158 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 COL8A1P27658 744 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 ANKRD55Q3KP44 614 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 C10orf113Q5VZT2 155 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 SLC35E4Q6ICL7 350 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 AMELYQ99218 206 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 GHITMQ9H3K2 345 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 ASCL3Q9NQ33 180 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 ZFC3H1O60293 1989 aaKnown RBP15.36■□□□□ 0.05
NPHP4-209ENST00000489180 LMX1BO60663 402 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 GCM2O75603 506 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-209ENST00000489180 TRIP6Q15654 476 aaKnown RBP15.36■□□□□ 0.05
NPHP4-209ENST00000489180 TMEM191AQ9H0A3 160 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 THYN1Q9P016 225 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 FCGR3AP08637 254 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 FUT5Q11128 374 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 ZNF519Q8TB69 540 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 PDE6DO43924 150 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 RPL24P83731 157 aaKnown RBP15.36■□□□□ 0.05
NPHP4-209ENST00000489180 CYB561D1Q8N8Q1 229 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms