RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 FAM46BQ96A09 425 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 CREB3L1Q96BA8 519 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 OCSTAMPQ9BR26 566 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 TMED9Q9BVK6 235 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 WNT10AQ9GZT5 417 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 NCOR1P1Q9H4R4 102 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 LINC00574Q9H8X3 128 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 LIN7BQ9HAP6 207 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 ERGIC3Q9Y282 383 aa11.19□□□□□ -0.62
VTI1A-206ENST00000489142 A0A1W2PPI3 338 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 ADARB2-AS1A8MUL3 147 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 G3V4G9 280 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 C15orf65H3BRN8 121 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 AIPO00170 330 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 SDCBPO00560 298 aaPredicted RBP11.18□□□□□ -0.62
VTI1A-206ENST00000489142 ZNF780AO75290 641 aaPredicted RBP11.18□□□□□ -0.62
VTI1A-206ENST00000489142 CRTAPO75718 401 aaPredicted RBP11.18□□□□□ -0.62
VTI1A-206ENST00000489142 OR2F2O95006 317 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 SNRNP70P08621 437 aaKnown RBP11.18□□□□□ -0.62
VTI1A-206ENST00000489142 MNDAP41218 407 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 REG1BP48304 166 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 GP2P55259 537 aaKnown RBP11.18□□□□□ -0.62
VTI1A-206ENST00000489142 HNF4GQ14541 408 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 C6orf141Q5SZD1 244 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 C10orf99Q6UWK7 81 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 ZNF497Q6ZNH5 498 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 LINC00596Q86U02 117 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 DTX3Q8N9I9 347 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 OR10X1Q8NGY0 326 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 OR4K15Q8NH41 348 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 RBMXL1Q96E39 390 aaKnown RBP11.18□□□□□ -0.62
VTI1A-206ENST00000489142 RBM14Q96PK6 669 aaKnown RBP11.18□□□□□ -0.62
VTI1A-206ENST00000489142 MND1Q9BWT6 205 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 SELENOIQ9C0D9 397 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 KCNK15Q9H427 330 aa11.18□□□□□ -0.62
VTI1A-206ENST00000489142 AMMECR1Q9Y4X0 333 aaPredicted RBP11.18□□□□□ -0.62
VTI1A-206ENST00000489142 ERICH4A6NGS2 130 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 H3BUI4 141 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 MT-ND4P03905 459 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 MGMTP16455 207 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 MADCAM1Q13477 382 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 GPR176Q14439 515 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 HES1Q14469 280 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 MED22Q15528 200 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 RAB12Q6IQ22 244 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 CCDC144NLQ6NUI1 221 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 C16orf82Q7Z2V1 217 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 C5orf24Q7Z6I8 188 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 LYPD6Q86Y78 171 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 PRR18Q8N4B5 295 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 OR5AU1Q8NGC0 362 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 AKR1E2Q96JD6 320 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 PCDHB16Q9NRJ7 776 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 ETAA1Q9NY74 926 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 RCC2Q9P258 522 aaKnown RBP11.17□□□□□ -0.62
VTI1A-206ENST00000489142 LSM2Q9Y333 95 aaKnown RBP11.17□□□□□ -0.62
VTI1A-206ENST00000489142 PEX16Q9Y5Y5 336 aa11.17□□□□□ -0.62
VTI1A-206ENST00000489142 TGP01266 2768 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 UBE2QL1A1L167 161 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 OOSP1A8MZH6 123 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 MCRIP1C9JLW8 97 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 SLC31A2O15432 143 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 OPN1MWP04001 364 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 CD1AP06126 327 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 OPN1MW2P0DN77 364 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 OPN1MW3P0DN78 364 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 ACSM3Q53FZ2 586 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 RBM48Q5RL73 367 aaKnown RBP11.16□□□□□ -0.62
VTI1A-206ENST00000489142 SYT6Q5T7P8 510 aaPredicted RBP11.16□□□□□ -0.62
VTI1A-206ENST00000489142 SIGIRRQ6IA17 410 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 OR10K2Q6IF99 312 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 CENPVQ7Z7K6 275 aaPredicted RBP11.16□□□□□ -0.62
VTI1A-206ENST00000489142 NDUFA11Q86Y39 141 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 OR10V1Q8NGI7 309 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 MYDGFQ969H8 173 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 R3HDM4Q96D70 268 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 TRAPPC2LQ9UL33 140 aa11.16□□□□□ -0.62
VTI1A-206ENST00000489142 C12orf77C9JDV5 145 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 HSD17B6O14756 317 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 IGKV1D-33P01593 117 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 IGKV1-33P01594 117 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 PRB2P02812 416 aaPredicted RBP11.15□□□□□ -0.62
VTI1A-206ENST00000489142 TMEM11P17152 192 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 GZMHP20718 246 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 MAPK3P27361 379 aaPredicted RBP11.15□□□□□ -0.62
VTI1A-206ENST00000489142 LOXL3P58215 753 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 GPR50Q13585 617 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 SPHARQ15513 63 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 TCTEX1D4Q5JR98 221 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 NKAPLQ5M9Q1 402 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 LIPKQ5VXJ0 399 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 MOB3BQ86TA1 216 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 LRRTM1Q86UE6 522 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 NKAIN3Q8N8D7 197 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 OR10A7Q8NGE5 316 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 OR1L1Q8NH94 360 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 TMEM203Q969S6 136 aa11.15□□□□□ -0.62
VTI1A-206ENST00000489142 Q96M66 194 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms