RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TMEM225BP0DP42 221 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 GALEQ14376 348 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 TMEM244Q5VVB8 128 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 ADGRG5Q8IZF4 528 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 LINC00311Q8N616 119 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 CNIH3Q8TBE1 160 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 UTP4Q969X6 686 aaKnown RBP12.45□□□□□ -0.42
USP48-210ENST00000489108 TOLLIPQ9H0E2 274 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 ARGLU1Q9NWB6 273 aaPredicted RBP12.45□□□□□ -0.42
USP48-210ENST00000489108 MYRFQ9Y2G1 1151 aa12.45□□□□□ -0.42
USP48-210ENST00000489108 ATP6V0E1O15342 81 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 MT-ND2P03891 347 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 OR2T7P0C7T2 308 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 MTNR1BP49286 362 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 MNAT1P51948 309 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 PITPNAQ00169 270 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 OR13C9Q8NGT0 318 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 IL17DQ8TAD2 202 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 UBALD1Q8TB05 177 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 TMEM163Q8TC26 289 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 CANT1Q8WVQ1 401 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 EME1Q96AY2 570 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 IL4I1Q96RQ9 567 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 FAM107BQ9H098 131 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 FAM118AQ9NWS6 357 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 KIAA1456Q9P272 454 aa12.44□□□□□ -0.42
USP48-210ENST00000489108 IGHV3-43A0A0B4J1X8 118 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 TRAV41A0A0B4J266 112 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 SDCBPO00560 298 aaPredicted RBP12.43□□□□□ -0.42
USP48-210ENST00000489108 HSPA12AO43301 675 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 SNX3O60493 162 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 IGHV3-43DP0DP04 118 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 DBTP11182 482 aaKnown RBP12.43□□□□□ -0.42
USP48-210ENST00000489108 ARSBP15848 533 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 GZMHP20718 246 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 IL3RAP26951 378 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 VHLP40337 213 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 TP53I3Q53FA7 332 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 OR10H4Q8NGA5 316 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 OR2G2Q8NGZ5 317 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 OR10AC1Q8NH08 325 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 LRGUKQ96M69 825 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 MBOAT4Q96T53 435 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 PARP11Q9NR21 331 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 GNG8Q9UK08 70 aa12.43□□□□□ -0.42
USP48-210ENST00000489108 B2RBV5 119 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 SLC31A2O15432 143 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 DAPP51397 102 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 PAX5Q02548 391 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 C8orf31Q8N9H6 132 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 MINDY2Q8NBR6 621 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 OR52M1Q8NGK5 317 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 CASTOR1Q8WTX7 329 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 ARL11Q969Q4 196 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 PRRG3Q9BZD7 231 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 RETNQ9HD89 108 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 GFOD1Q9NXC2 390 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 FRRS1LQ9P0K9 344 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 ZNF581Q9P0T4 197 aa12.42□□□□□ -0.42
USP48-210ENST00000489108 IGHV7-81A0A0B4J1V7 117 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 C15orf65H3BRN8 121 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 IGLV1-51P01701 117 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 ISG15P05161 165 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 LGALS1P09382 135 aaKnown RBP12.41□□□□□ -0.42
USP48-210ENST00000489108 EPHA2P29317 976 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 KCNJ3P48549 501 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 MMDQ15546 238 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 KISS1Q15726 138 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 ZSCAN26Q16670 478 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 ELP2Q6IA86 826 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 GID4Q8IVV7 300 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 ARHGAP24Q8N264 748 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 OR51A4Q8NGJ6 313 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 RITA1Q96K30 269 aa12.41□□□□□ -0.42
USP48-210ENST00000489108 WARS2Q9UGM6 360 aaKnown RBP12.41□□□□□ -0.42
USP48-210ENST00000489108 MRPS28Q9Y2Q9 187 aaKnown RBP12.41□□□□□ -0.42
USP48-210ENST00000489108 SOX15O60248 233 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 HSPB1P04792 205 aaKnown RBP12.4□□□□□ -0.42
USP48-210ENST00000489108 CNTFRP26992 372 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 BLVRBP30043 206 aaPredicted RBP12.4□□□□□ -0.42
USP48-210ENST00000489108 ZNF134P52741 427 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 NANOS3P60323 173 aaKnown RBP12.4□□□□□ -0.42
USP48-210ENST00000489108 ZNF85Q03923 595 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 IL13RA2Q14627 380 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 PIGYQ3MUY2 71 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 C12orf73Q69YU5 71 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 SLC25A48Q6ZT89 311 aaKnown RBP12.4□□□□□ -0.42
USP48-210ENST00000489108 FAM220AQ7Z4H9 259 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 ANKRD13BQ86YJ7 626 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 SUMF2Q8NBJ7 301 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 OR13C3Q8NGS6 347 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 CCDC107Q8WV48 283 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 DNAJC9Q8WXX5 260 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 RSRP1Q9BUV0 290 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 DPCDQ9BVM2 203 aaPredicted RBP12.4□□□□□ -0.42
USP48-210ENST00000489108 ELOVL1Q9BW60 279 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 ANKRD60Q9BZ19 345 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 TUBA4BQ9H853 241 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 STUB1Q9UNE7 303 aa12.4□□□□□ -0.42
USP48-210ENST00000489108 C12orf77C9JDV5 145 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms