RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 MS4A15Q8N5U1 240 aa19.99■□□□□ 0.79
HMGN1-217ENST00000489072 FAM110DQ8TAY7 271 aaPredicted RBP19.99■□□□□ 0.79
HMGN1-217ENST00000489072 UBALD1Q8TB05 177 aa19.99■□□□□ 0.79
HMGN1-217ENST00000489072 WIPF2Q8TF74 440 aaPredicted RBP19.99■□□□□ 0.79
HMGN1-217ENST00000489072 CCDC107Q8WV48 283 aa19.99■□□□□ 0.79
HMGN1-217ENST00000489072 DUSP21Q9H596 190 aa19.99■□□□□ 0.79
HMGN1-217ENST00000489072 OOSP1A8MZH6 123 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 H0YHG0 523 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 MGMTP16455 207 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 GZMHP20718 246 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 VHLP40337 213 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 ARHGDIBP52566 201 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 C16orf82Q7Z2V1 217 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 LRRTM1Q86UE6 522 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 UQCC2Q9BRT2 126 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 SELENOIQ9C0D9 397 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 WNT10AQ9GZT5 417 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 LIN7BQ9HAP6 207 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 TPRKBQ9Y3C4 175 aa19.98■□□□□ 0.79
HMGN1-217ENST00000489072 AMMECR1Q9Y4X0 333 aaPredicted RBP19.98■□□□□ 0.79
HMGN1-217ENST00000489072 CRTAPO75718 401 aaPredicted RBP19.97■□□□□ 0.79
HMGN1-217ENST00000489072 SC5DO75845 299 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 CSF1P09603 554 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 DIAPH2-AS1Q14236 149 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 RAB12Q6IQ22 244 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 FAM53AQ6NSI3 398 aaPredicted RBP19.97■□□□□ 0.79
HMGN1-217ENST00000489072 CCDC144NLQ6NUI1 221 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 SLC16A12Q6ZSM3 486 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 TOMM40LQ969M1 308 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 ARL11Q969Q4 196 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 RPEQ96AT9 228 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 Q96M66 194 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 OCSTAMPQ9BR26 566 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 SLC25A33Q9BSK2 321 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 SPACA1Q9HBV2 294 aa19.97■□□□□ 0.79
HMGN1-217ENST00000489072 A0A1W2PPE3 182 aa19.96■□□□□ 0.79
HMGN1-217ENST00000489072 AIPO00170 330 aa19.96■□□□□ 0.79
HMGN1-217ENST00000489072 CD28P10747 220 aa19.96■□□□□ 0.79
HMGN1-217ENST00000489072 MNDAP41218 407 aa19.96■□□□□ 0.79
HMGN1-217ENST00000489072 SIGIRRQ6IA17 410 aa19.96■□□□□ 0.79
HMGN1-217ENST00000489072 RBM14Q96PK6 669 aaKnown RBP19.96■□□□□ 0.79
HMGN1-217ENST00000489072 PEX16Q9Y5Y5 336 aa19.96■□□□□ 0.79
HMGN1-217ENST00000489072 A0A1W2PPI3 338 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A10PA6NDY2 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A18PA6NE21 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A16PA6NEW6 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A20PA6NIJ5 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A7PA6NKC0 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A12PA8MX19 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A5PA8MXJ8 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A23PA8MXZ1 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 MCRIP1C9JLW8 97 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 H3BUI4 141 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 OR2F2O95006 317 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A15PP0C7V4 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A13PP0C7W8 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A14PP0C7W9 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A24PP0C7X0 464 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 VDAC2P45880 294 aaPredicted RBP19.95■□□□□ 0.78
HMGN1-217ENST00000489072 MADCAM1Q13477 382 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 GPR50Q13585 617 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 ARSJQ5FYB0 599 aaPredicted RBP19.95■□□□□ 0.78
HMGN1-217ENST00000489072 LIPKQ5VXJ0 399 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 IZUMO2Q6UXV1 221 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 CEACAM19Q7Z692 300 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 LYG1Q8N1E2 194 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 PHYHIPQ92561 330 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM46BQ96A09 425 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 ETAA1Q9NY74 926 aa19.95■□□□□ 0.78
HMGN1-217ENST00000489072 FAM90A9PA6NNJ1 464 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 RGS10O43665 173 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 ORC5O43913 435 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 FBXO24O75426 580 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 AMY1AP04745 511 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 AMY2AP04746 511 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 CRHBPP24387 322 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 LOXL3P58215 753 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 DEFA6Q01524 100 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 RBM48Q5RL73 367 aaKnown RBP19.94■□□□□ 0.78
HMGN1-217ENST00000489072 GAPTQ8N292 157 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 OR52M1Q8NGK5 317 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 OR4K15Q8NH41 348 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 CAPSLQ8WWF8 208 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 AKR1E2Q96JD6 320 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 VCX3BQ9H321 246 aa19.94■□□□□ 0.78
HMGN1-217ENST00000489072 IGHV3-43A0A0B4J1X8 118 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 SH2D7A6NKC9 451 aaPredicted RBP19.93■□□□□ 0.78
HMGN1-217ENST00000489072 C12orf77C9JDV5 145 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 SDCBPO00560 298 aaPredicted RBP19.93■□□□□ 0.78
HMGN1-217ENST00000489072 UCHL1P09936 223 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 IGHV3-43DP0DP04 118 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 C1orf100Q5SVJ3 147 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 SYT6Q5T7P8 510 aaPredicted RBP19.93■□□□□ 0.78
HMGN1-217ENST00000489072 DRAM1Q8N682 238 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 OR10X1Q8NGY0 326 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 OR56B4Q8NH76 319 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 UFD1Q92890 307 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 TMEM203Q969S6 136 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 GFOD1Q9NXC2 390 aa19.93■□□□□ 0.78
HMGN1-217ENST00000489072 GHRLQ9UBU3 117 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms